RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PRDM10Q9NQV6 1147 aa26.18■■□□□ 1.78
HOMER3-205ENST00000542541 POLR3EQ9NVU0 708 aa26.18■■□□□ 1.78
HOMER3-205ENST00000542541 ZHX1Q9UKY1 873 aaPredicted RBP26.18■■□□□ 1.78
HOMER3-205ENST00000542541 HTTP42858 3142 aa26.18■■□□□ 1.78
HOMER3-205ENST00000542541 LAD1O00515 517 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 TBX3O15119 743 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 BAG4O95429 457 aaKnown RBP26.17■■□□□ 1.78
HOMER3-205ENST00000542541 KRT85P78386 507 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 LENG9Q96B70 501 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 USP28Q96RU2 1077 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 KATNBL1Q9H079 304 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 TFIP11Q9UBB9 837 aaKnown RBP26.17■■□□□ 1.78
HOMER3-205ENST00000542541 MRVI1Q9Y6F6 885 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 SLC37A4O43826 429 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 TTLL4Q14679 1199 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 TAPT1Q6NXT6 567 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 FAM20AQ96MK3 541 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 CLIC4Q9Y696 253 aa26.17■■□□□ 1.78
HOMER3-205ENST00000542541 RBM47A0AV96 593 aaKnown RBP26.16■■□□□ 1.78
HOMER3-205ENST00000542541 ARP10275 920 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 CEBPZQ03701 1054 aaKnown RBP26.16■■□□□ 1.78
HOMER3-205ENST00000542541 PTGDRQ13258 359 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 CALCRLQ16602 461 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 PRAMEF19Q5SWL8 479 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 IQSEC1Q6DN90 963 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 SLFN12Q8IYM2 578 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 ZNF577Q9BSK1 485 aa26.16■■□□□ 1.78
HOMER3-205ENST00000542541 NCLP19338 710 aaKnown RBP26.15■■□□□ 1.78
HOMER3-205ENST00000542541 POTEDQ86YR6 584 aa26.15■■□□□ 1.78
HOMER3-205ENST00000542541 GIMAP8Q8ND71 665 aaPredicted RBP26.15■■□□□ 1.78
HOMER3-205ENST00000542541 TNPO1Q92973 898 aaKnown RBP26.15■■□□□ 1.78
HOMER3-205ENST00000542541 SENP7Q9BQF6 1050 aa26.15■■□□□ 1.78
HOMER3-205ENST00000542541 AGO4Q9HCK5 861 aaKnown RBP26.15■■□□□ 1.78
HOMER3-205ENST00000542541 KCNMB3Q9NPA1 279 aa26.15■■□□□ 1.78
HOMER3-205ENST00000542541 IPO5O00410 1097 aaKnown RBP26.14■■□□□ 1.78
HOMER3-205ENST00000542541 MSH4O15457 936 aa26.14■■□□□ 1.78
HOMER3-205ENST00000542541 ZNF865P0CJ78 1059 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-205ENST00000542541 NASPP49321 788 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-205ENST00000542541 CACNB2Q08289 660 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-205ENST00000542541 CCDC144BQ3MJ40 725 aa26.14■■□□□ 1.78
HOMER3-205ENST00000542541 FBXO46Q6PJ61 603 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-205ENST00000542541 PDGFCQ9NRA1 345 aa26.14■■□□□ 1.78
HOMER3-205ENST00000542541 FAM184BQ9ULE4 1060 aa26.14■■□□□ 1.78
HOMER3-205ENST00000542541 YEATS4O95619 227 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 OR52Z1P0C646 297 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 TXNP10599 105 aaKnown RBP26.14■■□□□ 1.77
HOMER3-205ENST00000542541 CYBAP13498 195 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 PRKAR2AP13861 404 aaKnown RBP26.14■■□□□ 1.77
HOMER3-205ENST00000542541 ATP2C1P98194 919 aaPredicted RBP26.14■■□□□ 1.77
HOMER3-205ENST00000542541 NEDD9Q14511 834 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 STK38Q15208 465 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 C4orf32Q8N8J7 132 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 ETNPPLQ8TBG4 499 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 MTMR9Q96QG7 549 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 FTOQ9C0B1 505 aaKnown RBP eCLIP26.14■■□□□ 1.77
HOMER3-205ENST00000542541 SCAND2PQ9GZW5 306 aaPredicted RBP26.14■■□□□ 1.77
HOMER3-205ENST00000542541 TBC1D22BQ9NU19 505 aa26.14■■□□□ 1.77
HOMER3-205ENST00000542541 SEMA3FQ13275 785 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 SLC39A14Q15043 492 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 SLC9C1Q4G0N8 1177 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 MAP3K21Q5TCX8 1036 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 ARL6IP4Q66PJ3 421 aaKnown RBP26.13■■□□□ 1.77
HOMER3-205ENST00000542541 CCDC62Q6P9F0 684 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 RIT2Q99578 217 aa26.13■■□□□ 1.77
HOMER3-205ENST00000542541 DDX41Q9UJV9 622 aaKnown RBP26.13■■□□□ 1.77
HOMER3-205ENST00000542541 NKRFO15226 690 aaKnown RBP eCLIP26.12■■□□□ 1.77
HOMER3-205ENST00000542541 INHAP05111 366 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 PRPHP41219 470 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 ADCYAP1R1P41586 468 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 TRIM32Q13049 653 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 PTPAQ15257 358 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 LINC00301Q8NCQ3 95 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 SLC5A5Q92911 643 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 SDF4Q9BRK5 362 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 TMEM60Q9H2L4 133 aa26.12■■□□□ 1.77
HOMER3-205ENST00000542541 MORC2Q9Y6X9 1032 aaPredicted RBP26.12■■□□□ 1.77
HOMER3-205ENST00000542541 AKR1A1P14550 325 aa26.11■■□□□ 1.77
HOMER3-205ENST00000542541 TNFAIP2Q03169 654 aa26.11■■□□□ 1.77
HOMER3-205ENST00000542541 HAS1Q92839 578 aa26.11■■□□□ 1.77
HOMER3-205ENST00000542541 PKD2L1Q9P0L9 805 aa26.11■■□□□ 1.77
HOMER3-205ENST00000542541 PCDHA12Q9UN75 941 aa26.11■■□□□ 1.77
HOMER3-205ENST00000542541 ATP9AO75110 1047 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 KCNA2P16389 499 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 CNGA1P29973 690 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 TXKP42681 527 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 DUSP28Q4G0W2 176 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 LRCH2Q5VUJ6 765 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 KCNG4Q8TDN1 519 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 TCEAL9Q9UHQ7 104 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 MCM3APO60318 1980 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 NFASCO94856 1347 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 LRRC37A2A6NM11 1700 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 SPTLC2O15270 562 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 SEPT4O43236 478 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 GAS7O60861 476 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 LY6KQ17RY6 165 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 DTHD1Q6ZMT9 781 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 TRPV1Q8NER1 839 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 RCOR1Q9UKL0 485 aa26.1■■□□□ 1.77
HOMER3-205ENST00000542541 ARIH2O95376 493 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms