RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 IFNAR1P17181 557 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-217ENST00000541869 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-217ENST00000541869 HLTFQ14527 1009 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR1B-217ENST00000541869 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 CDC42EP5Q6NZY7 148 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
POLR1B-217ENST00000541869 MTA3Q9BTC8 594 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
POLR1B-217ENST00000541869 TMEM39AQ9NV64 488 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 MAPK8IP1Q9UQF2 711 aa11.32□□□□□ -0.6
POLR1B-217ENST00000541869 ZNF202O95125 648 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 DLATP10515 647 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 SP3Q02447 781 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 NEDD1Q8NHV4 660 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 MSCO60682 206 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CRACR2AQ9BSW2 395 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 PAXBP1Q9Y5B6 917 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 PFASO15067 1338 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 GIPC1O14908 333 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 ADCY5O95622 1261 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CPB1P15086 417 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 PSMC4P43686 418 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 APLP1P51693 650 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 ALX1Q15699 326 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 RPUSD2Q8IZ73 545 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 NDUFAF2Q8N183 169 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 TDRD7Q8NHU6 1098 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 SOCS4Q8WXH5 440 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CGNQ9P2M7 1197 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 K7ERI5 159 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 PTGDRQ13258 359 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 TRIM14Q14142 442 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-217ENST00000541869 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
POLR1B-217ENST00000541869 F8W8V4 182 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 SNAP25P60880 206 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CCDC77Q9BR77 488 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 NUP58Q9BVL2 599 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 SYNRGQ9UMZ2 1314 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 SPOPO43791 374 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 FKBP1BP68106 108 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 MAPK6Q16659 721 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 MCPH1Q8NEM0 835 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 DPF2Q92785 391 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CACYBPQ9HB71 228 aaKnown RBP11.3□□□□□ -0.6
POLR1B-217ENST00000541869 METTL14Q9HCE5 456 aaKnown RBP11.3□□□□□ -0.6
POLR1B-217ENST00000541869 MTUS1Q9ULD2 1270 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
POLR1B-217ENST00000541869 FAM193AP78312 1265 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
POLR1B-217ENST00000541869 ASIC2Q16515 512 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 ZSCAN23Q3MJ62 389 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CHST13Q8NET6 341 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 RICTORQ6R327 1708 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 MEGF6O75095 1541 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CEMIPQ8WUJ3 1361 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 HOXA2O43364 376 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 ITKQ08881 620 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 SLC44A5Q8NCS7 719 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 FBXO18Q8NFZ0 1043 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CCDC127Q96BQ5 260 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 OPTNQ96CV9 577 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
POLR1B-217ENST00000541869 CTSHP09668 335 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 CCT6BQ92526 530 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 C2orf40Q9H1Z8 148 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 ZNF302Q9NR11 478 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 RFX7Q2KHR2 1363 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
POLR1B-217ENST00000541869 UBE2SQ16763 222 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 SEPT8Q92599 483 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 PKNOX2Q96KN3 472 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 MROH8Q9H579 483 aa11.29□□□□□ -0.6
POLR1B-217ENST00000541869 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms