RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 ASNSP08243 561 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 ADCYAP1R1P41586 468 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 TLE2Q04725 743 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
LMO3-226ENST00000541589 PPM1EQ8WY54 764 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
LMO3-226ENST00000541589 LZTS2Q9BRK4 669 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 TMEM134Q9H6X4 195 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 DNAJC18Q9H819 358 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 STX8Q9UNK0 236 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 KCNJ14Q9UNX9 436 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 CLIC4Q9Y696 253 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 CHD9Q3L8U1 2897 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 IGKV6D-41A0A0C4DH26 115 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
LMO3-226ENST00000541589 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 SPTLC2O15270 562 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 SEPT4O43236 478 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 RNF40O75150 1001 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 CLTBP09497 229 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 BMP1P13497 986 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 SCG2P13521 617 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 ME1P48163 572 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 CCNA1P78396 465 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 SLC39A14Q15043 492 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 LRRC41Q15345 812 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
LMO3-226ENST00000541589 PFKFB3Q16875 520 aaPredicted RBP9.31□□□□□ -0.92
LMO3-226ENST00000541589 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
LMO3-226ENST00000541589 OLFML2BQ68BL8 750 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 ADALQ6DHV7 355 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 LBX2Q6XYB7 198 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 CEP95Q96GE4 821 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 C12orf42Q96LP6 360 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 LRFN3Q9BTN0 628 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 BRMS1Q9HCU9 246 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 DACT1Q9NYF0 836 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 MAD2L2Q9UI95 211 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 PCDHA7Q9UN72 937 aa9.31□□□□□ -0.92
LMO3-226ENST00000541589 PPP6R2O75170 966 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 AKR1B1P15121 316 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 SHMT1P34896 483 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 KRT2P35908 639 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 KCNC4Q03721 635 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 FPGSQ05932 587 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 RILPL1Q5EBL4 403 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 CCDC73Q6ZRK6 1079 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 FAM177A1Q8N128 213 aaPredicted RBP9.3□□□□□ -0.92
LMO3-226ENST00000541589 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
LMO3-226ENST00000541589 FERMT2Q96AC1 680 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 NECAB3Q96P71 396 aaPredicted RBP9.3□□□□□ -0.92
LMO3-226ENST00000541589 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 RBSNQ9H1K0 784 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 PRDM12Q9H4Q4 367 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 SH3GLB2Q9NR46 395 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 MTMR4Q9NYA4 1195 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 VPS54Q9P1Q0 977 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 BTBD7Q9P203 1132 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 PHF24Q9UPV7 400 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 SIPA1L1O43166 1804 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 PIEZO1Q92508 2521 aa9.3□□□□□ -0.92
LMO3-226ENST00000541589 hCG_1642624A0A1W2PR95 340 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 NR1I2O75469 434 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 OATP04181 439 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 PARP1P09874 1014 aaKnown RBP9.29□□□□□ -0.92
LMO3-226ENST00000541589 RAG1P15918 1043 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 PTPAQ15257 358 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 CATSPERGQ6ZRH7 1159 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 RBM43Q6ZSC3 357 aaKnown RBP9.29□□□□□ -0.92
LMO3-226ENST00000541589 FOXP4Q8IVH2 680 aaPredicted RBP9.29□□□□□ -0.92
LMO3-226ENST00000541589 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 FSIP1Q8NA03 581 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 FUCA2Q9BTY2 467 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
LMO3-226ENST00000541589 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 HCN4Q9Y3Q4 1203 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 MYH6P13533 1939 aa9.29□□□□□ -0.92
LMO3-226ENST00000541589 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 KLRF2D3W0D1 207 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CTAGE5O15320 804 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms