RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SYNPO2Q9UMS6 1093 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 TMX2Q9Y320 296 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 POTEB2H3BUK9 544 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 RPN1P04843 607 aaKnown RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 STAT6P42226 847 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 ZSCAN26Q16670 478 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 WHAMMP3Q1A5X7 153 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 BTNL9Q6UXG8 535 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 MSL3Q8N5Y2 521 aaKnown RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 MYO1AQ9UBC5 1043 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 LTBP3Q9NS15 1303 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 TECP42680 631 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 PLIN2Q99541 437 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 ARHGEF10LQ9HCE6 1279 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 TFR2Q9UP52 801 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 TTC26A0AVF1 554 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 UBA7P41226 1012 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 MAP3K10Q02779 954 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 CTAGE15A4D2H0 777 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 CTAGE8P0CG41 777 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 CAP2P40123 477 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 IKQ13123 557 aaPredicted RBP19.12■□□□□ 0.65
SPIDR-227ENST00000541342 GPS2Q13227 327 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 CTAGE6Q86UF2 777 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 CTAGE4Q8IX94 777 aa19.12■□□□□ 0.65
SPIDR-227ENST00000541342 ASTN2O75129 1339 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 NDUFA10O95299 355 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 LMAN1P49257 510 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 RASA3Q14644 834 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 AK8Q96MA6 479 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 VPS18Q9P253 973 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 MYO6Q9UM54 1294 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 SRCAPQ6ZRS2 3230 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 A0A0U1RQG5 324 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 GMPSP49915 693 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 UBXN1Q04323 297 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 SPAG1Q07617 926 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 TRIM14Q14142 442 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 CALCRLQ16602 461 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 WDR59Q6PJI9 974 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 TEPSINQ96N21 525 aa19.11■□□□□ 0.65
SPIDR-227ENST00000541342 MMTAG2Q9BU76 263 aaKnown RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 GLIS2Q9BZE0 524 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-227ENST00000541342 FZD9O00144 591 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 MEIS2O14770 477 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 RPS12P25398 132 aaKnown RBP19.1■□□□□ 0.65
SPIDR-227ENST00000541342 TXKP42681 527 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 CASP8Q14790 479 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 USH1GQ495M9 461 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 SAMD7Q7Z3H4 446 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 CCDC84Q86UT8 332 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-227ENST00000541342 AMNQ9BXJ7 453 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 HDAC6Q9UBN7 1215 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 PRR12Q9ULL5 1215 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 EPN1Q9Y6I3 576 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-227ENST00000541342 PPP4R3AQ6IN85 833 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 TRAPPC11Q7Z392 1133 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 CABP7Q86V35 215 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 ADSSL1Q8N142 457 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 ZNF507Q8TCN5 953 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 LRRIQ3A6PVS8 624 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-227ENST00000541342 HERVK_113P62684 666 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 FAM83BQ5T0W9 1011 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 DNAJC7Q99615 494 aa19.1■□□□□ 0.65
SPIDR-227ENST00000541342 PHF20L1A8MW92 1017 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 FBXO11Q86XK2 927 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 RASSF8Q8NHQ8 419 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 FAN1Q9Y2M0 1017 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 GJA3Q9Y6H8 435 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 ENC1O14682 589 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 PLCG1P19174 1290 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 GOPCQ9HD26 462 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 LCMT1Q9UIC8 334 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 GUCA1BQ9UMX6 200 aa19.09■□□□□ 0.65
SPIDR-227ENST00000541342 OPLAHO14841 1288 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 ERLIN1O75477 346 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 TUBB4BP68371 445 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 ZYXQ15942 572 aaKnown RBP19.08■□□□□ 0.65
SPIDR-227ENST00000541342 MB21D1Q8N884 522 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 UPF1Q92900 1129 aaKnown RBP eCLIP19.08■□□□□ 0.65
SPIDR-227ENST00000541342 FXR2P51116 673 aaKnown RBP eCLIP19.08■□□□□ 0.65
SPIDR-227ENST00000541342 STAT2P52630 851 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 WDR93Q6P2C0 686 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 KBTBD4Q9NVX7 518 aa19.08■□□□□ 0.65
SPIDR-227ENST00000541342 LGALS16A8MUM7 142 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 KLRC4O43908 158 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 TBC1D10BQ4KMP7 808 aaPredicted RBP19.08■□□□□ 0.64
SPIDR-227ENST00000541342 GOLGA5Q8TBA6 731 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 HAS1Q92839 578 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 GJA10Q969M2 543 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 GLT8D2Q9H1C3 349 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 DDX25Q9UHL0 483 aaKnown RBP19.08■□□□□ 0.64
SPIDR-227ENST00000541342 CNOT7Q9UIV1 285 aaKnown RBP19.08■□□□□ 0.64
SPIDR-227ENST00000541342 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.64
SPIDR-227ENST00000541342 H7C1D1 291 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 ANO3Q9BYT9 981 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 VCPKMTQ9H867 229 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 RMND1Q9NWS8 449 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms