RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CARNMT1Q8N4J0 409 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 BBOF1Q8ND07 529 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 SYTL4Q96C24 671 aaPredicted RBP6.78□□□□□ -1.32
LMO3-225ENST00000541295 ABCF3Q9NUQ8 709 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 BABAM1Q9NWV8 329 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 GALNT8Q9NY28 637 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 AIPL1Q9NZN9 384 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 PA2G4Q9UQ80 394 aaKnown RBP6.78□□□□□ -1.32
LMO3-225ENST00000541295 EXOC6BQ9Y2D4 811 aa6.78□□□□□ -1.32
LMO3-225ENST00000541295 KDM6AO15550 1401 aaPredicted RBP6.78□□□□□ -1.32
LMO3-225ENST00000541295 XPOTO43592 962 aaKnown RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 ARIH2O95376 493 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 GNAI2P04899 355 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CTNNA1P35221 906 aaKnown RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 PHEXP78562 749 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 DAB2P98082 770 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 KIF5AQ12840 1032 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 WLSQ5T9L3 541 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 TWF2Q6IBS0 349 aaKnown RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 CFAP161Q6P656 301 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CAPN12Q6ZSI9 719 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 USP48Q86UV5 1035 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 AFAP1L1Q8TED9 768 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 DCAF5Q96JK2 942 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SNX27Q96L92 541 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 OXCT2Q9BYC2 517 aaPredicted RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ZWILCHQ9H900 591 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ATP6V0A4Q9HBG4 840 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ATP6V1DQ9Y5K8 247 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 NCAPD2Q15021 1401 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ZEB2O60315 1214 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 LILRB3O75022 631 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 EPN2O95208 641 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 PRLRP16471 622 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CHKAP35790 457 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 LIG3P49916 1009 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 RUNX1T1Q06455 604 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 DPYSQ14117 519 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 KLHL40Q2TBA0 621 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 MTERF2Q49AM1 385 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CCDC40Q4G0X9 1142 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 PCNX4Q63HM2 1172 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CLEC17AQ6ZS10 378 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SH3BP5LQ7L8J4 393 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CCDC84Q86UT8 332 aaPredicted RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 IFNL1Q8IU54 200 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ERO1AQ96HE7 468 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 NELL2Q99435 816 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 TSG101Q99816 390 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SERHL2Q9H4I8 314 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 UBN1Q9NPG3 1134 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 GPR108Q9NPR9 543 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 DBF4Q9UBU7 674 aaPredicted RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 PHF24Q9UPV7 400 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SH3GLB1Q9Y371 365 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 CCDC171Q6TFL3 1326 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 USO1O60763 962 aaKnown RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 KATNA1O75449 491 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 TSPAN9O75954 239 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 GFPT2O94808 682 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 HSD17B2P37059 387 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ZNF746Q6NUN9 644 aaPredicted RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 ANGPTL8Q6UXH0 198 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 RTL10Q7L3V2 364 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 BRAPQ7Z569 592 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 C16orf71Q8IYS4 520 aaPredicted RBP6.77□□□□□ -1.33
LMO3-225ENST00000541295 GALNT15Q8N3T1 639 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 ANKRD44Q8N8A2 993 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 TCF12Q99081 682 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 SIL1Q9H173 461 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 STIM2Q9P246 746 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 TMCO1Q9UM00 188 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 MAP3K2Q9Y2U5 619 aa6.77□□□□□ -1.33
LMO3-225ENST00000541295 PRRT4C9JH25 899 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 GNAI3P08754 354 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 MTHFRP42898 656 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 DSTNP60981 165 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 SHROOM1Q2M3G4 852 aaPredicted RBP6.76□□□□□ -1.33
LMO3-225ENST00000541295 GRAMD4Q6IC98 578 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 INTS8Q75QN2 995 aaKnown RBP6.76□□□□□ -1.33
LMO3-225ENST00000541295 B4GALNT4Q76KP1 1039 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 NLRP14Q86W24 1093 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 CCDC83Q8IWF9 413 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 SLC16A10Q8TF71 515 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 HOOK2Q96ED9 719 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 TUBA1CQ9BQE3 449 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 NDFIP2Q9NV92 336 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 COL5A2P05997 1499 aaPredicted RBP6.76□□□□□ -1.33
LMO3-225ENST00000541295 LMO7Q8WWI1 1683 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 FAM208AQ9UK61 1670 aaKnown RBP6.76□□□□□ -1.33
LMO3-225ENST00000541295 SPECC1L-ADORA2AF8WAN1 911 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 ZSCAN12O43309 604 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 RHOXF2BP0C7M4 288 aa6.76□□□□□ -1.33
LMO3-225ENST00000541295 GNAT1P11488 350 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms