RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 F5H6K3 240 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 TTLL1O95922 423 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 PDHBP11177 359 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 STAT6P42226 847 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 KLRC3Q07444 240 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 APOBEC3FQ8IUX4 373 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 CAPZA3Q96KX2 299 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 ATP8B1O43520 1251 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 HMGCS2P54868 508 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 FAM83BQ5T0W9 1011 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 NT5DC1Q5TFE4 455 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 CHP1Q99653 195 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 RNF40O75150 1001 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 NDUFB10O96000 172 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 SRGAP1Q7Z6B7 1085 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 PPM1EQ8WY54 764 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 KAT2BQ92831 832 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 SWAP70Q9UH65 585 aa15.93■□□□□ 0.14
SFSWAP-210ENST00000541286 KLRF2D3W0D1 207 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 CELF2O95319 508 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 PAK1Q13153 545 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE1Q96RT6 745 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 L1RE1Q9UN81 338 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 MYH4Q9Y623 1939 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 IQCA1LA6NCM1 817 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 KCNJ18B7U540 433 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 SRGAP2O75044 1071 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 KCNJ12Q14500 433 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 USP50Q70EL3 339 aaPredicted RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 CNGA4Q8IV77 575 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 FERMT2Q96AC1 680 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 HERC5Q9UII4 1024 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 LAMA2P24043 3122 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 CORO7P57737 925 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 TSR1Q2NL82 804 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 HEATR3Q7Z4Q2 680 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 PANX2Q96RD6 677 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 HDAC6Q9UBN7 1215 aa15.92■□□□□ 0.14
SFSWAP-210ENST00000541286 EIF3JO75822 258 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 FKBP1CQ5VVH2 108 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 CST9Q5W186 159 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 PIGSQ96S52 555 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 SLC1A4P43007 532 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 COPB1P53618 953 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 ERVK-24P63145 666 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 TMEM179Q6ZVK1 233 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 TMTC3Q6ZXV5 915 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 COA7Q96BR5 231 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 TRIM47Q96LD4 638 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 ZNF287Q9HBT7 754 aa15.91■□□□□ 0.14
SFSWAP-210ENST00000541286 CCDC194A0A1B0GVG4 234 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 IRF6O14896 467 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 SCG2P13521 617 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 BANK1Q8NDB2 785 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 R3HDMLQ9H3Y0 253 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 CDC23Q9UJX2 597 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 PRCPP42785 496 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 FUT2Q10981 343 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 APTXQ7Z2E3 356 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE15A4D2H0 777 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 RPN1P04843 607 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE8P0CG41 777 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 PTPRAP18433 802 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 UBA7P41226 1012 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 BRD3Q15059 726 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 INF2Q27J81 1249 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 USH1GQ495M9 461 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 TMED8Q6PL24 325 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE6Q86UF2 777 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE4Q8IX94 777 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 MTRQ99707 1265 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
SFSWAP-210ENST00000541286 ERLIN1O75477 346 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 IL17AQ16552 155 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 NAPGQ99747 312 aaPredicted RBP15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 ABHD10Q9NUJ1 306 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 PSD3Q9NYI0 1048 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 CXorf56Q9H5V9 222 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 ERLIN2O94905 339 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 PARP1P09874 1014 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 KCTD19Q17RG1 926 aaPredicted RBP15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 CCDC178Q5BJE1 867 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 CCDC174Q6PII3 467 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 KIAA1328Q86T90 577 aa15.89■□□□□ 0.13
SFSWAP-210ENST00000541286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms