RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.37■■□□□ 1.01
VPS33A-205ENST00000541169 MEIS1O00470 390 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 ADAMTS4O75173 837 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 CABYRO75952 493 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 FARP2O94887 1054 aaPredicted RBP21.37■■□□□ 1.01
VPS33A-205ENST00000541169 C6orf222P0C671 652 aaPredicted RBP21.37■■□□□ 1.01
VPS33A-205ENST00000541169 GCFC2P16383 781 aaKnown RBP21.37■■□□□ 1.01
VPS33A-205ENST00000541169 GJB2P29033 226 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 GNASQ5JWF2 1037 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 KLHDC9Q8NEP7 349 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
VPS33A-205ENST00000541169 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
VPS33A-205ENST00000541169 DYNC1LI2O43237 492 aaPredicted RBP21.36■■□□□ 1.01
VPS33A-205ENST00000541169 ITGB5P18084 799 aa21.36■■□□□ 1.01
VPS33A-205ENST00000541169 RGS19P49795 217 aa21.36■■□□□ 1.01
VPS33A-205ENST00000541169 FSCN1Q16658 493 aaKnown RBP21.36■■□□□ 1.01
VPS33A-205ENST00000541169 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
VPS33A-205ENST00000541169 DIS3L2Q8IYB7 885 aaKnown RBP21.36■■□□□ 1.01
VPS33A-205ENST00000541169 TBCKQ8TEA7 893 aa21.36■■□□□ 1.01
VPS33A-205ENST00000541169 ADCY6O43306 1168 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 PGK1P00558 417 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 GNL2Q13823 731 aaKnown RBP21.35■■□□□ 1.01
VPS33A-205ENST00000541169 CELF3Q5SZQ8 465 aaKnown RBP21.35■■□□□ 1.01
VPS33A-205ENST00000541169 ANO1Q5XXA6 986 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 METTL7BQ6UX53 244 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 NEK8Q86SG6 692 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 OR6J1Q8NGC5 347 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 PPTC7Q8NI37 304 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 POLR3EQ9NVU0 708 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 PHF24Q9UPV7 400 aa21.35■■□□□ 1.01
VPS33A-205ENST00000541169 MYH7BA7E2Y1 1941 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 CYP3A7-CYP3A51PA0A087WV96 503 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 A6NJR5 290 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
VPS33A-205ENST00000541169 CYP3A7P24462 503 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 LY6KQ17RY6 165 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 UBE2Q1Q7Z7E8 422 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 MLXIPQ9HAP2 919 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 KCNH7Q9NS40 1196 aa21.34■■□□□ 1.01
VPS33A-205ENST00000541169 NFASCO94856 1347 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 BTBD18B2RXH4 712 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 H3BQV1 296 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 PPFIA4O75335 1185 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 ARIH2O95376 493 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1.01
VPS33A-205ENST00000541169 ARHGAP1Q07960 439 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 BECN1Q14457 450 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 GJC2Q5T442 439 aaPredicted RBP21.33■■□□□ 1.01
VPS33A-205ENST00000541169 IFFO2Q5TF58 517 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 MYSM1Q5VVJ2 828 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 LARP1BQ659C4 914 aaKnown RBP21.33■■□□□ 1.01
VPS33A-205ENST00000541169 PPP4R3AQ6IN85 833 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 PLA2G4DQ86XP0 818 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 TNFRSF25Q93038 417 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 SDF4Q9BRK5 362 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 HTATIP2Q9BUP3 242 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 C11orf49Q9H6J7 331 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 GJB4Q9NTQ9 266 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 TBC1D22BQ9NU19 505 aa21.33■■□□□ 1.01
VPS33A-205ENST00000541169 ELP1O95163 1332 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 GGPS1O95749 300 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 COL6A1P12109 1028 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 ACLYP53396 1101 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 ORC2Q13416 577 aaPredicted RBP21.32■■□□□ 1
VPS33A-205ENST00000541169 KCNA10Q16322 511 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 DGKDQ16760 1214 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 Q4G0T1 1027 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 CCSAPQ6IQ19 270 aaPredicted RBP21.32■■□□□ 1
VPS33A-205ENST00000541169 GLT1D1Q96MS3 346 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 TCEAL9Q9UHQ7 104 aa21.32■■□□□ 1
VPS33A-205ENST00000541169 IGLV3-22A0A075B6J6 115 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 FAM86B1E9PN63 330 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 ADAMTS3O15072 1205 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
VPS33A-205ENST00000541169 FAM86B2P0C5J1 330 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 U2AF2P26368 475 aaKnown RBP eCLIP21.31■■□□□ 1
VPS33A-205ENST00000541169 TRAPPC10P48553 1259 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 MNX1P50219 401 aaPredicted RBP21.31■■□□□ 1
VPS33A-205ENST00000541169 INF2Q27J81 1249 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 NOSTRINQ8IVI9 506 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 OXER1Q8TDS5 423 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 LENG1Q96BZ8 264 aaPredicted RBP21.31■■□□□ 1
VPS33A-205ENST00000541169 PAWRQ96IZ0 340 aaKnown RBP21.31■■□□□ 1
VPS33A-205ENST00000541169 SPATA33Q96N06 139 aa21.31■■□□□ 1
VPS33A-205ENST00000541169 NOP56O00567 594 aaKnown RBP21.3■■□□□ 1
VPS33A-205ENST00000541169 CTAGE5O15320 804 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 ASGR1P07306 291 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 HOXD8P13378 290 aaPredicted RBP21.3■■□□□ 1
VPS33A-205ENST00000541169 KCNA2P16389 499 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 SP2Q02086 613 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 SEMA3FQ13275 785 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 NR5A1Q13285 461 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 PRR16Q569H4 304 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 C1orf53Q5VUE5 145 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 MBOAT7Q96N66 472 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 RIT2Q99578 217 aa21.3■■□□□ 1
VPS33A-205ENST00000541169 AGO4Q9HCK5 861 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms