RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 FAM200BP0CF97 657 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 PPP2R2AP63151 447 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 DEUP1Q05D60 604 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 INF2Q27J81 1249 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 PABPC1LQ4VXU2 614 aaKnown RBP10.67□□□□□ -0.7
CLDN2-202ENST00000540876 EPHA10Q5JZY3 1008 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 SEPT14Q6ZU15 432 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
CLDN2-202ENST00000540876 DHX32Q7L7V1 743 aaKnown RBP10.67□□□□□ -0.7
CLDN2-202ENST00000540876 CTAGE1Q96RT6 745 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 VCXQ9H320 206 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
CLDN2-202ENST00000540876 SALL1Q9NSC2 1324 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 A0A087WZG4 1122 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 GLI1P08151 1106 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 KRT16P08779 473 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 PDIA3P30101 505 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SEPT2Q15019 361 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 RESP18Q5W5W9 173 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 RAB11FIP4Q86YS3 637 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 KLHL29Q96CT2 875 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 CHMP6Q96FZ7 201 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 ECT2Q9H8V3 914 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SNX12Q9UMY4 172 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SH3TC1Q8TE82 1336 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 IFIT3O14879 490 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 ORC4O43929 436 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 ZPR1O75312 459 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 HEXIM1O94992 359 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 CHGBP05060 677 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 MORC3Q14149 939 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SPATA1Q5VX52 437 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 TBC1D9BQ66K14 1250 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 GIGYF2Q6Y7W6 1299 aaKnown RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 CEP128Q6ZU80 1094 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 STOX1Q6ZVD7 989 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 MDM1Q8TC05 714 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 FBF1Q8TES7 1133 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SMCR8Q8TEV9 937 aaPredicted RBP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SPATA7Q9P0W8 599 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 LNPEPQ9UIQ6 1025 aa10.66□□□□□ -0.7
CLDN2-202ENST00000540876 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLDN2-202ENST00000540876 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 ANO9A1A5B4 782 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 RCCD1A6NED2 376 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 ABLIM1O14639 778 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 FLOT1O75955 427 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 CYP11B2P19099 503 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 FUT4P22083 530 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 PAFAH1B1P43034 410 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 BPIFB4P59827 614 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 CUL4BQ13620 913 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 GCKRQ14397 625 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 SGSM1Q2NKQ1 1148 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 NFRKBQ6P4R8 1299 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 TRPM8Q7Z2W7 1104 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 PHC3Q8NDX5 983 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 RBM12Q9NTZ6 932 aaKnown RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 ABCF3Q9NUQ8 709 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 SUN2Q9UH99 717 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 SERTAD1Q9UHV2 236 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 ZMYND8Q9ULU4 1186 aaPredicted RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 MED23Q9ULK4 1368 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 UBOX5O94941 541 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 NCALDP61601 193 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 KRT83P78385 493 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 DPY19L2Q6NUT2 758 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 SLC17A8Q8NDX2 589 aa10.65□□□□□ -0.7
CLDN2-202ENST00000540876 ELAC2Q9BQ52 826 aaKnown RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLDN2-202ENST00000540876 CACNA1FO60840 1977 aa10.65□□□□□ -0.71
CLDN2-202ENST00000540876 SMAPO00193 183 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 POLR2DO15514 142 aaKnown RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 RPL13P26373 211 aaKnown RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 MSH2P43246 934 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 RAD23BP54727 409 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 MDM2Q00987 491 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 SUSD4Q5VX71 490 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 TAB2Q9NYJ8 693 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 SWAP70Q9UH65 585 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 ATP6V1C1P21283 382 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 GSTT1P30711 240 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 PSMC4P43686 418 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 CCNG1P51959 295 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 MAGOHP61326 146 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms