RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
CBX3P4-202ENST00000540428 RIOX1Q9H6W3 641 aa13.94□□□□□ -0.18
CBX3P4-202ENST00000540428 EMSYQ7Z589 1322 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 GCOM1H8Y6P7 765 aaPredicted RBP13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 LPXNO60711 386 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 POLR2MP0CAP2 368 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 ZNF286BP0CG31 522 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 MYCLP12524 364 aaPredicted RBP13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 CCND2P30279 289 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 DEFB103AP81534 67 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 IKBKEQ14164 716 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 GRM4Q14833 912 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 SPATA33Q96N06 139 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 IL25Q9H293 177 aa13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
CBX3P4-202ENST00000540428 ERICH2A1L162 156 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 STAM2O75886 525 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 GGPS1O95749 300 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 UBA1P22314 1058 aaKnown RBP13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 KCNQ1P51787 676 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 ERVK-21P61565 698 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 ZNF618Q5T7W0 954 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 TET1Q8NFU7 2136 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 HLA-CQ95604 372 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
CBX3P4-202ENST00000540428 PNMA6FA0A0J9YX94 578 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 LGR5O75473 907 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 CYP21A2P08686 494 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 HOXC8P31273 242 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 SP2Q02086 613 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 SART3Q15020 963 aaKnown RBP13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 KRT40Q6A162 431 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 IL31RAQ8NI17 732 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 WNT8BQ93098 351 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 NECAB3Q96P71 396 aaPredicted RBP13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 TGS1Q96RS0 853 aaKnown RBP13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 PIGSQ96S52 555 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 MLXIPQ9HAP2 919 aa13.91□□□□□ -0.18
CBX3P4-202ENST00000540428 FRMPD4Q14CM0 1322 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 IFIT3O14879 490 aaKnown RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 CYTH3O43739 400 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 CAND2O75155 1236 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 ICAM3P32942 547 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 ZNF200P98182 395 aaPredicted RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 TROAPQ12815 778 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 HIC1Q14526 733 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 MBTPS1Q14703 1052 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 WTAPQ15007 396 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 SPRED2Q7Z698 418 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 SUGCTQ9HAC7 445 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 INSL6Q9Y581 213 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 NCOR1O75376 2440 aa13.9□□□□□ -0.18
CBX3P4-202ENST00000540428 TRIP12Q14669 1992 aaPredicted RBP13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 H3BRB1 525 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 LGALS2P05162 132 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 THPOP40225 353 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 NEDD9Q14511 834 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 ATP6V0A1Q93050 837 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 INPP4AQ96PE3 977 aaPredicted RBP13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 TUT1Q9H6E5 874 aaKnown RBP13.89□□□□□ -0.19
CBX3P4-202ENST00000540428 SPATA31C2B4DYI2 1134 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 E7EWF7 191 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 NOP56O00567 594 aaKnown RBP13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 FIBPO43427 364 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 SORBS3O60504 671 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 AMHP03971 560 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 SMIM10L2AP0DMW4 78 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 SMIM10L2BP0DMW5 78 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 CHMLP26374 656 aa13.88□□□□□ -0.19
CBX3P4-202ENST00000540428 PDE4AP27815 886 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms