RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TMEM260Q9NX78 707 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 B4GALT4O60513 344 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 DTNBO60941 627 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 ICAM3P32942 547 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 ADCY7P51828 1080 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 HSDL1Q3SXM5 330 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
UBE3B-212ENST00000540230 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-212ENST00000540230 KAT2BQ92831 832 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-212ENST00000540230 TRPV6Q9H1D0 765 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 TELO2Q9Y4R8 837 aa17.29■□□□□ 0.36
UBE3B-212ENST00000540230 SPDYE3A6NKU9 549 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 STAM2O75886 525 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 CLK2P49760 499 aaKnown RBP17.28■□□□□ 0.36
UBE3B-212ENST00000540230 LAMC2Q13753 1193 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-212ENST00000540230 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-212ENST00000540230 TPCN1Q9ULQ1 816 aa17.28■□□□□ 0.36
UBE3B-212ENST00000540230 FIBPO43427 364 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 ZNF286BP0CG31 522 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 TGFB3P10600 412 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 RAG1P15918 1043 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 ITGB5P18084 799 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 AK2P54819 239 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 KCNV1Q6PIU1 500 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 PPTC7Q8NI37 304 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 ANO3Q9BYT9 981 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 PPP1R12CQ9BZL4 782 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
UBE3B-212ENST00000540230 TRMT13Q9NUP7 481 aaKnown RBP17.27■□□□□ 0.36
UBE3B-212ENST00000540230 UMODL1Q5DID0 1318 aa17.27■□□□□ 0.36
UBE3B-212ENST00000540230 A0A1W2PPC1 479 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 SOX1O00570 391 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-212ENST00000540230 KPNA6O60684 536 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 EPHB4P54760 987 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 SCRN1Q12765 414 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 TDHQ8IZJ6 230 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 SPATA33Q96N06 139 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 UBIAD1Q9Y5Z9 338 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
UBE3B-212ENST00000540230 ATP9AO75110 1047 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 LARGE1O95461 756 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 HOXD8P13378 290 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-212ENST00000540230 DGKDQ16760 1214 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 CYFIP1Q7L576 1253 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 ZMYND12Q9H0C1 365 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
UBE3B-212ENST00000540230 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
UBE3B-212ENST00000540230 TIMP1P01033 207 aa17.25■□□□□ 0.35
UBE3B-212ENST00000540230 AKAP17AQ02040 695 aaKnown RBP17.25■□□□□ 0.35
UBE3B-212ENST00000540230 CYP2W1Q8TAV3 490 aa17.25■□□□□ 0.35
UBE3B-212ENST00000540230 RASGRP4Q8TDF6 673 aa17.25■□□□□ 0.35
UBE3B-212ENST00000540230 GPRASP2Q96D09 838 aa17.25■□□□□ 0.35
UBE3B-212ENST00000540230 F2P00734 622 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 CYP2C9P11712 490 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 KCNA2P16389 499 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 CYP2C18P33260 490 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 METTL7BQ6UX53 244 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 LRCH3Q96II8 777 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 PKD2L1Q9P0L9 805 aa17.24■□□□□ 0.35
UBE3B-212ENST00000540230 RBAK-RBAKDNI3L0D1 243 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 HAS3O00219 553 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 CPLX1O14810 134 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 PFKFB2O60825 505 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SREBF1P36956 1147 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 PSEN2P49810 448 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SP4Q02446 784 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
UBE3B-212ENST00000540230 NEDD9Q14511 834 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SHHQ15465 462 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 C16orf70Q9BSU1 422 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 SLKQ9H2G2 1235 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-212ENST00000540230 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
UBE3B-212ENST00000540230 PPFIA4O75335 1185 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 CSF2RAP15509 400 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 NEK4P51957 841 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 FPGSQ05932 587 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms