RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 HAS3O00219 553 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 BAIAP3O94812 1187 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 MBTPS1Q14703 1052 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 FAM117BQ6P1L5 589 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 DHX37Q8IY37 1157 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 C7orf31Q8N865 590 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
SEMA4D-222ENST00000540183 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 F2P00734 622 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 CXCL10P02778 98 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 SP2Q02086 613 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 RBL2Q08999 1139 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 ZNF618Q5T7W0 954 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 CNKSR3Q6P9H4 555 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 EMID1Q96A84 441 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 MAF1Q9H063 256 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 MTUS1Q9ULD2 1270 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
SEMA4D-222ENST00000540183 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 HIP1O00291 1037 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 PDE4AP27815 886 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 GHRHRQ02643 423 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 PGM5Q15124 567 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 PIGSQ96S52 555 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 ZBED2Q9BTP6 218 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
SEMA4D-222ENST00000540183 ZBTB5O15062 677 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 GGPS1O95749 300 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 GSPT1P15170 499 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 NT5C2P49902 561 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 PTK7Q13308 1070 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 CELF3Q5SZQ8 465 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 SPATA33Q96N06 139 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 KATNAL1Q9BW62 490 aa16.55■□□□□ 0.24
SEMA4D-222ENST00000540183 CYTH3O43739 400 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 AAMPQ13685 434 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 GRM4Q14833 912 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 OSBPL7Q9BZF2 842 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 TELO2Q9Y4R8 837 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 LOXHD1Q8IVV2 1947 aa16.54■□□□□ 0.24
SEMA4D-222ENST00000540183 LINC01553A4QN01 128 aa16.53■□□□□ 0.24
SEMA4D-222ENST00000540183 GJB5O95377 273 aa16.53■□□□□ 0.24
SEMA4D-222ENST00000540183 CYP21A2P08686 494 aa16.53■□□□□ 0.24
SEMA4D-222ENST00000540183 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
SEMA4D-222ENST00000540183 MYO7AQ13402 2215 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 ABHD14A-ACY1A0A1B0GW23 586 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 THPOP40225 353 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 IKBKEQ14164 716 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 AAK1Q2M2I8 961 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 TTC22Q5TAA0 569 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 HLA-CQ95604 372 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 EPHX3Q9H6B9 360 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 COG5Q9UP83 839 aa16.52■□□□□ 0.24
SEMA4D-222ENST00000540183 RALGAPA2Q2PPJ7 1873 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 LGR5O75473 907 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 CCND2P30279 289 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 ERVK-21P61565 698 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 SEMA3FQ13275 785 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 SERINC5Q86VE9 423 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 DBF4BQ8NFT6 615 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 RAD9AQ99638 391 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 C17orf80Q9BSJ5 609 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
SEMA4D-222ENST00000540183 TREHO43280 583 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 PARNO95453 639 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 LGALS2P05162 132 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 SMIM10L2AP0DMW4 78 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 SMIM10L2BP0DMW5 78 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 ANTXR2P58335 489 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 KCNV1Q6PIU1 500 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms