RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
BNIP3-202ENST00000540159 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
BNIP3-202ENST00000540159 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 TRIM66O15016 1216 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 ACTN1P12814 892 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 RAPGEF1Q13905 1077 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 MTMR8Q96EF0 704 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 RIOX1Q9H6W3 641 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 EIF3CLB5ME19 914 aaKnown RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 ATP2B4P23634 1241 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 GGCXP38435 758 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 EIF3CQ99613 913 aaKnown RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 LSM14BQ9BX40 385 aaKnown RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 BCS1LQ9Y276 419 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 SIK3Q9Y2K2 1263 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 HOXA13P31271 388 aaPredicted RBP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 PSMC6P62333 389 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 PRR16Q569H4 304 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 SND1Q7KZF4 910 aaKnown RBP eCLIP15.13■□□□□ 0.01
BNIP3-202ENST00000540159 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 C10orf67Q8IYJ2 551 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 PACSIN1Q9BY11 444 aa15.13■□□□□ 0.01
BNIP3-202ENST00000540159 DDX60LQ5H9U9 1706 aaKnown RBP15.12■□□□□ 0.01
BNIP3-202ENST00000540159 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 MYH1P12882 1939 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 TRIM37O94972 964 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 TTLL1O95922 423 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 CASP5P51878 434 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 UBXN2AP68543 259 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 FAM26FQ5R3K3 315 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 FAM133AQ8N9E0 248 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 PCDHA1Q9Y5I3 950 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 USO1O60763 962 aaKnown RBP15.12■□□□□ 0.01
BNIP3-202ENST00000540159 IL1R1P14778 569 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 PLCG2P16885 1265 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 KCNMA1Q12791 1236 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 TCERG1LQ5VWI1 586 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 MYOCDQ8IZQ8 938 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 HNRNPLLQ8WVV9 542 aaKnown RBP15.12■□□□□ 0.01
BNIP3-202ENST00000540159 ERGIC2Q96RQ1 377 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 EHD4Q9H223 541 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 ADAMTS1Q9UHI8 967 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 PLAGL2Q9UPG8 496 aa15.12■□□□□ 0.01
BNIP3-202ENST00000540159 TACC1O75410 805 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 MYL1P05976 194 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 EPS15P42566 896 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
BNIP3-202ENST00000540159 PAPD7Q5XG87 772 aaKnown RBP15.11■□□□□ 0.01
BNIP3-202ENST00000540159 LRRC55Q6ZSA7 311 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 NOC3LQ8WTT2 800 aaKnown RBP15.11■□□□□ 0.01
BNIP3-202ENST00000540159 CUL5Q93034 780 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 SHMT1P34896 483 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 DCAF17Q5H9S7 520 aaPredicted RBP15.11■□□□□ 0.01
BNIP3-202ENST00000540159 RAB34Q9BZG1 259 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 RSPH14Q9UHP6 348 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 QRICH1Q2TAL8 776 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 CDC42EP5Q6NZY7 148 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 CREG2Q8IUH2 290 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 TBC1D5Q92609 795 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
BNIP3-202ENST00000540159 RREB1Q92766 1687 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 PPEF1O14829 653 aaPredicted RBP15.1■□□□□ 0.01
BNIP3-202ENST00000540159 CHMP2AO43633 222 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 LEKR1Q6ZMV7 388 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 IFT81Q8WYA0 676 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 ZNF622Q969S3 477 aaKnown RBP eCLIP15.1■□□□□ 0.01
BNIP3-202ENST00000540159 OSBPL9Q96SU4 736 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
BNIP3-202ENST00000540159 TSG101Q99816 390 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 BTAF1O14981 1849 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 PNMA6FA0A0J9YX94 578 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 TOM1O60784 492 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 MED24O75448 989 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
BNIP3-202ENST00000540159 PLA2G4BP0C869 781 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 RSPH10BP0C881 870 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 TRADDQ15628 312 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 KSR1Q8IVT5 923 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 CCDC170Q8IYT3 715 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 DNAJC19Q96DA6 116 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.011e-6■■■■■ 118.1
BNIP3-202ENST00000540159 HPCAL4Q9UM19 191 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 SNX12Q9UMY4 172 aa15.1■□□□□ 0.01
BNIP3-202ENST00000540159 VGLL3A8MV65 326 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms