RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 VEGFBP49765 207 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 ATP2B2Q01814 1243 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 KIF23Q02241 960 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-204ENST00000540083 SEPT2Q15019 361 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 CCL15Q16663 113 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 PRRT2Q7Z6L0 340 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-204ENST00000540083 ANKRD23Q86SG2 305 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 C17orf53Q8N3J3 647 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-204ENST00000540083 GPATCH11Q8N954 259 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 CHMP4CQ96CF2 233 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 DDX11Q96FC9 970 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 DRC1Q96MC2 740 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 NEK1Q96PY6 1258 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
NECAP1-204ENST00000540083 PAIP2Q9BPZ3 127 aaKnown RBP8.47□□□□□ -1.05
NECAP1-204ENST00000540083 SAGE1Q9NXZ1 904 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 MTMR4Q9NYA4 1195 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 PNMA2Q9UL42 364 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 STX8Q9UNK0 236 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 TMX2Q9Y320 296 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 WDR19Q8NEZ3 1342 aa8.47□□□□□ -1.05
NECAP1-204ENST00000540083 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 EFCAB8A8MWE9 144 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 B4E1Z4 1266 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 WDR46O15213 610 aaKnown RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 PRDM1O75626 825 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 EEF2P13639 858 aaKnown RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 PTGS1P23219 599 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 OAS2P29728 719 aaKnown RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 NEDD9Q14511 834 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 MCM6Q14566 821 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 MAP9Q49MG5 647 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 IFIT1BQ5T764 474 aaKnown RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 RNF217Q8TC41 542 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 ANKS1AQ92625 1134 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 KCNB2Q92953 911 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 SMARCE1Q969G3 411 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 SGSM3Q96HU1 749 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 C12orf42Q96LP6 360 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 ZSCAN10Q96SZ4 725 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 PARK7Q99497 189 aaKnown RBP8.46□□□□□ -1.06
NECAP1-204ENST00000540083 TM6SF1Q9BZW5 370 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 VCPKMTQ9H867 229 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 KAT14Q9H8E8 782 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 HOXC10Q9NYD6 342 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 CLIP2Q9UDT6 1046 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 FZD1Q9UP38 647 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 AGTPBP1Q9UPW5 1226 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
NECAP1-204ENST00000540083 IGKV6D-41A0A0C4DH26 115 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 H0YHG0 523 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 IFIT3O14879 490 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 LILRA1O75019 489 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CALM1P0DP23 149 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CALM2P0DP24 149 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CALM3P0DP25 149 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 HOXA7P31268 230 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 GCLCP48506 637 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 ZNF75DP51815 510 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 NFX1Q12986 1120 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 TRAF1Q13077 416 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 IRF5Q13568 498 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CRYMQ14894 314 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 WTAPQ15007 396 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 PPP2R5BQ15173 497 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 ANKRD1Q15327 319 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 TMEM132AQ24JP5 1023 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 GADL1Q6ZQY3 521 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 DHX32Q7L7V1 743 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 TBC1D10CQ8IV04 446 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 GMCL1P1Q8NEA9 526 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CHURC1Q8WUH1 139 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 ERCC4Q92889 916 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-204ENST00000540083 CEP95Q96GE4 821 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 IL25Q9H293 177 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 GDPD2Q9HCC8 539 aa8.45□□□□□ -1.06
NECAP1-204ENST00000540083 IMPACTQ9P2X3 320 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms