RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 CABS1Q96KC9 395 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 PNMA5Q96PV4 448 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 LRRC4CQ9HCJ2 640 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 ADAMTS1Q9UHI8 967 aa15.36■□□□□ 0.05
SCNN1A-215ENST00000540037 FSBPO95073 299 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 TMOD1P28289 359 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 HLTFQ14527 1009 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC84Q86UT8 332 aaPredicted RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 ARPP21Q9UBL0 812 aaPredicted RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 KLRF2D3W0D1 207 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 UBE4AQ14139 1066 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 TMEM47Q9BQJ4 181 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 MKNK2Q9HBH9 465 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 ATP8A2Q9NTI2 1148 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 FLT3P36888 993 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 GSCP56915 257 aaPredicted RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 ERVK-9P63128 1117 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 KIAA0753Q2KHM9 967 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 GLE1Q53GS7 698 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 DAGLBQ8NCG7 672 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 AK8Q96MA6 479 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 NEUROG2Q9H2A3 272 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
SCNN1A-215ENST00000540037 LAD1O00515 517 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 SLC37A4O43826 429 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 MAP2K2P36507 400 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 AMPD3Q01432 767 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 SF3A3Q12874 501 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 QPCTQ16769 361 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 NEK8Q86SG6 692 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 CALML4Q96GE6 196 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 LSM14BQ9BX40 385 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 AP1M1Q9BXS5 423 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 BCCIPQ9P287 314 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 SAP30BPQ9UHR5 308 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 ECHS1P30084 290 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 UAP1Q16222 522 aaPredicted RBP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 ECM1Q16610 540 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 DGKHQ86XP1 1220 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 FAM133AQ8N9E0 248 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 LARP4BQ92615 738 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 DDX12PQ92771 950 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 CXorf56Q9H5V9 222 aa15.34■□□□□ 0.05
SCNN1A-215ENST00000540037 CASZ1Q86V15 1759 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 GRID2IPA4D2P6 1211 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 DCDC2CA8MYV0 355 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 RAPGEF1Q13905 1077 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 NAB2Q15742 525 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 CDC37Q16543 378 aaPredicted RBP15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 MEI1Q5TIA1 1274 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 C12orf60Q5U649 245 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 UNC13DQ70J99 1090 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 NELFCDQ8IXH7 590 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 MAGEF1Q9HAY2 307 aa15.33■□□□□ 0.05
SCNN1A-215ENST00000540037 KCNK3O14649 394 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 TDP2O95551 362 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 SSBP05455 408 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 HSD17B3P37058 310 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 ACTN3Q08043 901 aaPredicted RBP15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 ITPK1Q13572 414 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 SLC9C1Q4G0N8 1177 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 SSU72P8A0A1W2PR75 194 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 TRAF5O00463 557 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 ATP2C2O75185 946 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 DIXDC1Q155Q3 683 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 PARP10Q53GL7 1025 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 FBXO33Q7Z6M2 555 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 CYFIP2Q96F07 1278 aa15.33■□□□□ 0.04
SCNN1A-215ENST00000540037 DCCP43146 1447 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 EDIL3O43854 480 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 GRIK5Q16478 980 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 CCDC40Q4G0X9 1142 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 SBK1Q52WX2 424 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 GUF1Q8N442 669 aaKnown RBP15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 PIGSQ96S52 555 aa15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 BSDC1Q9NW68 430 aaPredicted RBP15.32■□□□□ 0.04
SCNN1A-215ENST00000540037 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms