RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C22orf23Q9BZE7 217 aa20.97■□□□□ 0.95
SNRPA1-203ENST00000540017 POLR3EQ9NVU0 708 aa20.97■□□□□ 0.95
SNRPA1-203ENST00000540017 VPS54Q9P1Q0 977 aa20.97■□□□□ 0.95
SNRPA1-203ENST00000540017 RANBP2P49792 3224 aaKnown RBP20.97■□□□□ 0.95
SNRPA1-203ENST00000540017 MYH7BA7E2Y1 1941 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 CTDNEP1O95476 244 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 GGPS1O95749 300 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 MMP3P08254 477 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 TGFB3P10600 412 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 ITGB5P18084 799 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 MAGEA10P43363 369 aaPredicted RBP20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 GNPTABQ3T906 1256 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 TOX2Q96NM4 488 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 GDF15Q99988 308 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 ANO3Q9BYT9 981 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 PRDM5Q9NQX1 630 aaPredicted RBP20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 UBIAD1Q9Y5Z9 338 aa20.96■□□□□ 0.95
SNRPA1-203ENST00000540017 FIBPO43427 364 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 FOSP01100 380 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 CLTBP09497 229 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 ITGB8P26012 769 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 RBM25P49756 843 aaKnown RBP20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 LAMC2Q13753 1193 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 BRDTQ58F21 947 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 TEX2Q8IWB9 1127 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 TRIM22Q8IYM9 498 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 MTG1Q9BT17 334 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 GLT8D2Q9H1C3 349 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 TELO2Q9Y4R8 837 aa20.95■□□□□ 0.94
SNRPA1-203ENST00000540017 MDM2Q00987 491 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 AP3B2Q13367 1082 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 HSDL1Q3SXM5 330 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 FAM126BQ8IXS8 530 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 PPTC7Q8NI37 304 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 CYP2W1Q8TAV3 490 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 CCDC12Q8WUD4 166 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 C6orf50Q9HD87 102 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 SCN10AQ9Y5Y9 1956 aa20.94■□□□□ 0.94
SNRPA1-203ENST00000540017 LTBP2Q14767 1821 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 DOCK5Q9H7D0 1870 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 DCDC2CA8MYV0 355 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 KPNA6O60684 536 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 ATP9AO75110 1047 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 DEXIO95424 95 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 SREBF1P36956 1147 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 ST3GAL1Q11201 340 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 NBPF20Q3BBV1 942 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 CPLX2Q6PUV4 134 aaKnown RBP20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 KAT2BQ92831 832 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 GPRASP2Q96D09 838 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 SPATA33Q96N06 139 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 EHMT1Q9H9B1 1298 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 SH3GLB2Q9NR46 395 aa20.93■□□□□ 0.94
SNRPA1-203ENST00000540017 KIAA0355O15063 1070 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 CD4P01730 458 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 HOXD8P13378 290 aaPredicted RBP20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 CYFIP1Q7L576 1253 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 NLRX1Q86UT6 975 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 REXO1Q8N1G1 1221 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 CRYGNQ8WXF5 182 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 GTF3C6Q969F1 213 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 MXRA8Q9BRK3 442 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 TRPV6Q9H1D0 765 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 MLXIPQ9HAP2 919 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 JADE2Q9NQC1 790 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 PRKAG2Q9UGJ0 569 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 TBX21Q9UL17 535 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 MROH7Q68CQ1 1323 aa20.92■□□□□ 0.94
SNRPA1-203ENST00000540017 GNA11P29992 359 aa20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 ARHGAP4P98171 946 aa20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 NPY5RQ15761 445 aa20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 DGKDQ16760 1214 aa20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 HABP4Q5JVS0 413 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 CCDC148Q8NFR7 591 aa20.91■□□□□ 0.94
SNRPA1-203ENST00000540017 B4GALT4O60513 344 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 CDKL5O76039 1030 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 ZNF286BP0CG31 522 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 FDPSP14324 419 aaKnown RBP20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 KCNA2P16389 499 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 BMP8BP34820 402 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 NLRP5P59047 1200 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 MTMR1Q13613 665 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 NEDD9Q14511 834 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 METTL7BQ6UX53 244 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 BADQ92934 168 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 SENP7Q9BQF6 1050 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 GJB4Q9NTQ9 266 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 PKD2L1Q9P0L9 805 aa20.9■□□□□ 0.94
SNRPA1-203ENST00000540017 STK36Q9NRP7 1315 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 EDIL3O43854 480 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 PPFIA4O75335 1185 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 ARP10275 920 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 CHMP4BP1P59074 171 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 GPR20Q99678 358 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 KCNH7Q9NS40 1196 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 TRMT13Q9NUP7 481 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms