RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 INPP4AQ96PE3 977 aaPredicted RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
DDB1-215ENST00000539712 SPATA31C2B4DYI2 1134 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 SORBS3O60504 671 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 PPFIA4O75335 1185 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 GGPS1O95749 300 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 F2P00734 622 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 CPA1P15085 419 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 ICAM3P32942 547 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 HSPA4P34932 840 aa19.34■□□□□ 0.69
DDB1-215ENST00000539712 CDX2Q99626 313 aaPredicted RBP19.34■□□□□ 0.69
DDB1-215ENST00000539712 FGBP02675 491 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 ZNF286BP0CG31 522 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 PBX2P40425 430 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 CHMP4BP1P59074 171 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 HIC1Q14526 733 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 KRT32Q14532 448 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 DHX38Q92620 1227 aaKnown RBP19.33■□□□□ 0.68
DDB1-215ENST00000539712 SPATA33Q96N06 139 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 PSTPIP2Q9H939 334 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 RTEL1Q9NZ71 1219 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 TELO2Q9Y4R8 837 aa19.33■□□□□ 0.68
DDB1-215ENST00000539712 CNTNAP5Q8WYK1 1306 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 PITPNM1O00562 1244 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 STAM2O75886 525 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 IQCF3P0C7M6 154 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 DNAJB2P25686 324 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 PSEN2P49810 448 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 GPNMBQ14956 572 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 PTGISQ16647 500 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 PCNX4Q63HM2 1172 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 TYW1BQ6NUM6 668 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 SMARCC2Q8TAQ2 1214 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 C16orf70Q9BSU1 422 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 HDAC6Q9UBN7 1215 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 GTF2IRD1Q9UHL9 959 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 SNX14Q9Y5W7 946 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 SCN5AQ14524 2016 aa19.32■□□□□ 0.68
DDB1-215ENST00000539712 RBAK-RBAKDNI3L0D1 243 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 ZBTB43O43298 467 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 CDC27P30260 824 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 MFSD10Q14728 455 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 KIAA0753Q2KHM9 967 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 XRRA1Q6P2D8 792 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 RPUSD2Q8IZ73 545 aaKnown RBP19.31■□□□□ 0.68
DDB1-215ENST00000539712 CUL5Q93034 780 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 PBX4Q9BYU1 374 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 TRANK1O15050 2925 aa19.31■□□□□ 0.68
DDB1-215ENST00000539712 TET1Q8NFU7 2136 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 TMEM265A0A087WTH1 108 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 HMGB1P09429 215 aaKnown RBP19.3■□□□□ 0.68
DDB1-215ENST00000539712 UBE2SQ16763 222 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 RTN1Q16799 776 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 SYNE3Q6ZMZ3 975 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 ALG1Q9BT22 464 aa19.3■□□□□ 0.68
DDB1-215ENST00000539712 RBM28Q9NW13 759 aaKnown RBP19.3■□□□□ 0.68
DDB1-215ENST00000539712 TRIP12Q14669 1992 aaPredicted RBP19.3■□□□□ 0.68
DDB1-215ENST00000539712 VCANP13611 3396 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 KLF18A0A0U1RQI7 1052 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 FIBPO43427 364 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 ITGB5P18084 799 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 ZNF200P98182 395 aaPredicted RBP19.29■□□□□ 0.68
DDB1-215ENST00000539712 RBL2Q08999 1139 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 GRIN2CQ14957 1233 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 TRIM71Q2Q1W2 868 aaKnown RBP19.29■□□□□ 0.68
DDB1-215ENST00000539712 GNPTABQ3T906 1256 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 METTL7BQ6UX53 244 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 CYFIP1Q7L576 1253 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 HEATR3Q7Z4Q2 680 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 DEFB128Q7Z7B8 93 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 WNT8BQ93098 351 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 MLXIPQ9HAP2 919 aa19.29■□□□□ 0.68
DDB1-215ENST00000539712 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
DDB1-215ENST00000539712 ATP9AO75110 1047 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 PFKMP08237 780 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 HOXC8P31273 242 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 RCAN1P53805 252 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 BFSP2Q13515 415 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 TRAF7Q6Q0C0 670 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 FBXL16Q8N461 479 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 C7orf31Q8N865 590 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 MYLIPQ8WY64 445 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 TIFAQ96CG3 184 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 JAKMIP1Q96N16 626 aaKnown RBP19.28■□□□□ 0.68
DDB1-215ENST00000539712 GPR20Q99678 358 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 SENP7Q9BQF6 1050 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 KATNAL1Q9BW62 490 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 AGXT2Q9BYV1 514 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 NOD1Q9Y239 953 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 REV3LO60673 3130 aa19.28■□□□□ 0.68
DDB1-215ENST00000539712 DOCK5Q9H7D0 1870 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 LGALS2P05162 132 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 RFC2P35250 354 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 ADD1P35611 737 aaKnown RBP19.27■□□□□ 0.68
DDB1-215ENST00000539712 APOBRQ0VD83 1088 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 NEDD9Q14511 834 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 Q6ZUG5 572 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms