RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TDRD12Q587J7 1177 aaKnown RBP15.6■□□□□ 0.09
UBE3B-210ENST00000539599 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 POTEEQ6S8J3 1075 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 PSTPIP2Q9H939 334 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 PACSIN2Q9UNF0 486 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-210ENST00000539599 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 GDF11O95390 407 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 SNHG28P0DPA3 235 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 CASP5P51878 434 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 SPA17Q15506 151 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 BAP1Q92560 729 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 MTMR8Q96EF0 704 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 DMGDHQ9UI17 866 aaKnown RBP15.6■□□□□ 0.09
UBE3B-210ENST00000539599 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 PNMA6FA0A0J9YX94 578 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 RGL2O15211 777 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 NOVP48745 357 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 MAN2A1Q16706 1144 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 FAM163AQ96GL9 167 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-210ENST00000539599 MAGEF1Q9HAY2 307 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 RIC8AQ9NPQ8 531 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 PANK4Q9NVE7 773 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 PCDHA12Q9UN75 941 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 ESYT2A0FGR8 921 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-210ENST00000539599 TLR2O60603 784 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 QRICH1Q2TAL8 776 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 TMEM119Q4V9L6 283 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 GJD4Q96KN9 370 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-210ENST00000539599 LRRC1Q9BTT6 524 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 NUP58Q9BVL2 599 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 GOLPH3Q9H4A6 298 aa15.59■□□□□ 0.09
UBE3B-210ENST00000539599 MED24O75448 989 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 NAP1L1P55209 391 aaKnown RBP15.58■□□□□ 0.09
UBE3B-210ENST00000539599 CCDC40Q4G0X9 1142 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 MSL1Q68DK7 614 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 APOBEC3HQ6NTF7 200 aaKnown RBP15.58■□□□□ 0.09
UBE3B-210ENST00000539599 CACNA2D4Q7Z3S7 1137 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 CREG2Q8IUH2 290 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.09
UBE3B-210ENST00000539599 PACSIN1Q9BY11 444 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 RABEP2Q9H5N1 569 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 SH2D4AQ9H788 454 aa15.58■□□□□ 0.09
UBE3B-210ENST00000539599 CCDC66A2RUB6 948 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 ANKRD65E5RJM6 399 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 BBOX1O75936 387 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 ACTN1P12814 892 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 CLK2P49760 499 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 PPARDQ03181 441 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 MEX3CQ5U5Q3 659 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 CYP2W1Q8TAV3 490 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 CUL5Q93034 780 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 PURBQ96QR8 312 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 ZC3H12CQ9C0D7 883 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 LCMT1Q9UIC8 334 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 SMCHD1A6NHR9 2005 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 NOL4O94818 638 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 CYP4A11Q02928 519 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 EHHADHQ08426 723 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 HERC4Q5GLZ8 1057 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 FAM26FQ5R3K3 315 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 SAMD1Q6SPF0 538 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 GPBP1Q86WP2 473 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 CCDC170Q8IYT3 715 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 TBC1D22AQ8WUA7 517 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 LSM14BQ9BX40 385 aaKnown RBP15.58■□□□□ 0.08
UBE3B-210ENST00000539599 PODXL2Q9NZ53 605 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 STK17AQ9UEE5 414 aa15.58■□□□□ 0.08
UBE3B-210ENST00000539599 ZSCAN5CA6NGD5 496 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-210ENST00000539599 ZBTB5O15062 677 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 EEF2P13639 858 aaKnown RBP15.57■□□□□ 0.08
UBE3B-210ENST00000539599 HOXA13P31271 388 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-210ENST00000539599 MAGEA1P43355 309 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 JAG1P78504 1218 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 HGSNATQ68CP4 663 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 PROCA1Q8NCQ7 364 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-210ENST00000539599 FAM204AQ9H8W3 233 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 PCDHA1Q9Y5I3 950 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 LY75O60449 1722 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 SYF2O95926 243 aaKnown RBP15.57■□□□□ 0.08
UBE3B-210ENST00000539599 FTCDO95954 541 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 POLD1P28340 1107 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 SEPT2Q15019 361 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 ZSCAN26Q16670 478 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 PRR16Q569H4 304 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 SPICE1Q8N0Z3 855 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 RETREG2Q8NC44 543 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 SNX12Q9UMY4 172 aa15.57■□□□□ 0.08
UBE3B-210ENST00000539599 PVALEFA0A1B0GWK0 134 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 CAPN2P17655 700 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms