RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ANKRD23Q86SG2 305 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 C7orf61Q8IZ16 206 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 FMR1NBQ8N0W7 255 aaPredicted RBP10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 CYP2W1Q8TAV3 490 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 MRPS27Q92552 414 aaKnown RBP10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 EPSTI1Q96J88 318 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 FAM161BQ96MY7 647 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 MTMR9Q96QG7 549 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 TEX13BQ9BXU2 312 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 PANK2Q9BZ23 570 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 DACT1Q9NYF0 836 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 HPSEQ9Y251 543 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 KIAA1217Q5T5P2 1943 aa10.4□□□□□ -0.74
RTN4IP1-204ENST00000539449 DOCK5Q9H7D0 1870 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 CYP3A7-CYP3A51PA0A087WV96 503 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 A0A087X0B3 334 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM237AA0A1B0GTK4 181 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 SPDYE3A6NKU9 549 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 PP2D1A8MPX8 630 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM86B1E9PN63 330 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 BMP15O95972 392 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM86B2P0C5J1 330 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 OR52Z1P0C646 297 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 CYP3A7P24462 503 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 CDC25AP30304 524 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 MAGEA10P43363 369 aaPredicted RBP10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 USP11P51784 963 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 TKFCQ3LXA3 575 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 PPP4R3AQ6IN85 833 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 MCF2L2Q86YR7 1114 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 RIOX2Q8IUF8 465 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 HAS1Q92839 578 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 LENG9Q96B70 501 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 SPATC1LQ9H0A9 340 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 UNC93B1Q9H1C4 597 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 A1CFQ9NQ94 594 aaKnown RBP10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 DDX25Q9UHL0 483 aaKnown RBP10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 PLXNB2O15031 1838 aa10.39□□□□□ -0.75
RTN4IP1-204ENST00000539449 ASTN1O14525 1302 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 IGLV3-22A0A075B6J6 115 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 TMEM265A0A087WTH1 108 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 NEMFO60524 1076 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 TFRCP02786 760 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 SYN1P17600 705 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 ERCC3P19447 782 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 EIF2AK2P19525 551 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 HOXD10P28358 340 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 CIITAP33076 1130 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 TXKP42681 527 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 PSMC4P43686 418 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 CNTN2Q02246 1040 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 PABPC4Q13310 644 aaKnown RBP eCLIP10.38□□□□□ -0.755e-8■■□□□ 13.9
RTN4IP1-204ENST00000539449 CAMK4Q16566 473 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZSCAN23Q3MJ62 389 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 MCTP2Q6DN12 878 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 PAWRQ96IZ0 340 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 UBE2OQ9C0C9 1292 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 ACAD9Q9H845 621 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 CYP39A1Q9NYL5 469 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 PNMA2Q9UL42 364 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 RABGAP1Q9Y3P9 1069 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
RTN4IP1-204ENST00000539449 MCM3APO60318 1980 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 FRMPD4Q14CM0 1322 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 LRRC37A2A6NM11 1700 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZNF202O95125 648 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ARP10275 920 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 CAPN2P17655 700 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 PRPHP41219 470 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 TECP42680 631 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ERVK-9P63128 1117 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ERVK-24P63145 666 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ORC2Q13416 577 aaPredicted RBP10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 CALCRLQ16602 461 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 PRR16Q569H4 304 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ARL6IP4Q66PJ3 421 aaKnown RBP10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 MOXD1Q6UVY6 613 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 DTHD1Q6ZMT9 781 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 SAMD3Q8N6K7 520 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ANKRD13CQ8N6S4 541 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 LRRC15Q8TF66 581 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 ERCC4Q92889 916 aaPredicted RBP10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 PORCNQ9H237 461 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 CLSTN2Q9H4D0 955 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms