RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 VAT1LQ9HCJ6 419 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 ZMIZ1Q9ULJ6 1067 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 MCM3APO60318 1980 aa11.03□□□□□ -0.64
GTF2H3-207ENST00000539429 CCDC69A6NI79 296 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 PRC1O43663 620 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 ADH1AP07327 375 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 CYP2C19P33261 490 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 RGS19P49795 217 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 CACNB2Q08289 660 aaPredicted RBP11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 DPYDQ12882 1025 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 KRT32Q14532 448 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 TKFCQ3LXA3 575 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 STOX1Q6ZVD7 989 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 FAM200AQ8TCP9 573 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 NUP133Q8WUM0 1156 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 PNMA2Q9UL42 364 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 RBM19Q9Y4C8 960 aaKnown RBP11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 RIPK3Q9Y572 518 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 TAF6LQ9Y6J9 622 aa11.02□□□□□ -0.65
GTF2H3-207ENST00000539429 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 TNRC18O15417 2968 aaPredicted RBP11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 COBLO75128 1261 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 SGPL1O95470 568 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 ICAM1P05362 532 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 HOXC6P09630 235 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 PDE4CQ08493 712 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 USH1GQ495M9 461 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 SYNE3Q6ZMZ3 975 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 STK32AQ8WU08 396 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 MAML3Q96JK9 1138 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 RANBP17Q9H2T7 1088 aaKnown RBP11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 CPVLQ9H3G5 476 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 USTQ9Y2C2 406 aa11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 BAZ2BQ9UIF8 2168 aaKnown RBP11.01□□□□□ -0.65
GTF2H3-207ENST00000539429 PTPDC1A2A3K4 754 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 KLRF2D3W0D1 207 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
GTF2H3-207ENST00000539429 DGAT1O75907 488 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 AVPP01185 164 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 SNHG28P0DPA3 235 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 GJA8P48165 433 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 SEC23AQ15436 765 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 OLFML2BQ68BL8 750 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
GTF2H3-207ENST00000539429 TMTC2Q8N394 836 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
GTF2H3-207ENST00000539429 FLRT1Q9NZU1 646 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 CNPY2Q9Y2B0 182 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 PFASO15067 1338 aa11□□□□□ -0.65
GTF2H3-207ENST00000539429 CAPN2P17655 700 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 KIF5BP33176 963 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 SEC13P55735 322 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 LAPTM4AQ15012 233 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 CDC37Q16543 378 aaPredicted RBP10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 PKDCCQ504Y2 493 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 TINF2Q9BSI4 451 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 PAK6Q9NQU5 681 aaPredicted RBP10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 ZNF536O15090 1300 aa10.99□□□□□ -0.65
GTF2H3-207ENST00000539429 TMEM229AB2RXF0 380 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 MSCO60682 206 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 HMGB1P09429 215 aaKnown RBP10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 CALM1P0DP23 149 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 CALM2P0DP24 149 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 CALM3P0DP25 149 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 TAL1P17542 331 aaPredicted RBP10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 CALML3P27482 149 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 GDF10P55107 478 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 ANTXR2P58335 489 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 GRM4Q14833 912 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 ZNF792Q3KQV3 632 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 MAP3K21Q5TCX8 1036 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 TMEM164Q5U3C3 297 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 ANO1Q5XXA6 986 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 FBXO11Q86XK2 927 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 ZNF654Q8IZM8 581 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
GTF2H3-207ENST00000539429 MEIOBQ8N635 442 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms