RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 HOXD8P13378 290 aaPredicted RBP16.5■□□□□ 0.23
PBX3-212ENST00000538998 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
PBX3-212ENST00000538998 GPM6BQ13491 265 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 TCEAL5Q5H9L2 206 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 ADHFE1Q8IWW8 467 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 TBC1D5Q92609 795 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 YME1L1Q96TA2 773 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
PBX3-212ENST00000538998 NSUN3Q9H649 340 aaKnown RBP16.5■□□□□ 0.23
PBX3-212ENST00000538998 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
PBX3-212ENST00000538998 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 NCK2O43639 380 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
PBX3-212ENST00000538998 THPOP40225 353 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 PLEKHG4Q58EX7 1191 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
PBX3-212ENST00000538998 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
PBX3-212ENST00000538998 NR3C2P08235 984 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 TMEM192Q8IY95 271 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 SEPT8Q92599 483 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 TOP1MTQ969P6 601 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 RNF41Q9H4P4 317 aaPredicted RBP16.48■□□□□ 0.23
PBX3-212ENST00000538998 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
PBX3-212ENST00000538998 CAND2O75155 1236 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
PBX3-212ENST00000538998 NT5C2P49902 561 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 HAND2P61296 217 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 HIC1Q14526 733 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 MYSM1Q5VVJ2 828 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 ESR2Q92731 530 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 MFSD14AQ96MC6 490 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 SPATA33Q96N06 139 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 POP1Q99575 1024 aaKnown RBP16.47■□□□□ 0.23
PBX3-212ENST00000538998 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
PBX3-212ENST00000538998 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 QRICH1Q2TAL8 776 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 HSDL1Q3SXM5 330 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 CELF3Q5SZQ8 465 aaKnown RBP16.46■□□□□ 0.23
PBX3-212ENST00000538998 HFE2Q6ZVN8 426 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 KIAA1217Q5T5P2 1943 aa16.46■□□□□ 0.23
PBX3-212ENST00000538998 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 UPP2O95045 317 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 GGPS1O95749 300 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 CFBP00751 764 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 HOXC8P31273 242 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 IRS1P35568 1242 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
PBX3-212ENST00000538998 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 APBB2Q92870 758 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 ZKSCAN3Q9BRR0 538 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 C16orf70Q9BSU1 422 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 IFIH1Q9BYX4 1025 aaKnown RBP16.45■□□□□ 0.22
PBX3-212ENST00000538998 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
PBX3-212ENST00000538998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
PBX3-212ENST00000538998 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
PBX3-212ENST00000538998 RGS20O76081 388 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 TGFB3P10600 412 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 HSD17B4P51659 736 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 GHRHRQ02643 423 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
PBX3-212ENST00000538998 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
PBX3-212ENST00000538998 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
PBX3-212ENST00000538998 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 NEDD4P46934 1319 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 CCDC171Q6TFL3 1326 aa16.44■□□□□ 0.22
PBX3-212ENST00000538998 C5orf67F2Z3F1 127 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 H3BRB1 525 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 RB1P06400 928 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 SMIM10L2AP0DMW4 78 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 SMIM10L2BP0DMW5 78 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 MYCLP12524 364 aaPredicted RBP16.43■□□□□ 0.22
PBX3-212ENST00000538998 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
PBX3-212ENST00000538998 CTNNB1P35222 781 aa16.43■□□□□ 0.22
PBX3-212ENST00000538998 LTBRP36941 435 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms