RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 ATP9AO75110 1047 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 ITGB5P18084 799 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 CCND2P30279 289 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 ICAM3P32942 547 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 GPNMBQ14956 572 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 PKN1Q16512 942 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 PCNX4Q63HM2 1172 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-204ENST00000538994 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 DEFB123Q8N688 67 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 PPTC7Q8NI37 304 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
CPT1A-204ENST00000538994 WNT8BQ93098 351 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
CPT1A-204ENST00000538994 C16orf70Q9BSU1 422 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 MTMR10Q9NXD2 777 aa12.67□□□□□ -0.38
CPT1A-204ENST00000538994 CXXC1Q9P0U4 656 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-204ENST00000538994 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
CPT1A-204ENST00000538994 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 F2P00734 622 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 EVCP57679 992 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 ZNF200P98182 395 aaPredicted RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 TRAF1Q13077 416 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 LAMC2Q13753 1193 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
CPT1A-204ENST00000538994 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
CPT1A-204ENST00000538994 EDIL3O43854 480 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 KPNA6O60684 536 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 DTNBO60941 627 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 REC8O95072 547 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 TGFB3P10600 412 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
CPT1A-204ENST00000538994 CLK2P49760 499 aaKnown RBP12.65□□□□□ -0.38
CPT1A-204ENST00000538994 PSEN2P49810 448 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 RCAN1P53805 252 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 DGKDQ16760 1214 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 FAM47CQ5HY64 1035 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 CYFIP1Q7L576 1253 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
CPT1A-204ENST00000538994 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 SEZ6LQ9BYH1 1024 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
CPT1A-204ENST00000538994 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
CPT1A-204ENST00000538994 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
CPT1A-204ENST00000538994 PPFIA4O75335 1185 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 SEC24BO95487 1268 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 KCNA2P16389 499 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 PBX2P40425 430 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 METAP2P50579 478 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPT1A-204ENST00000538994 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■■■■ 29.1
CPT1A-204ENST00000538994 MFSD10Q14728 455 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 TCTN1Q2MV58 587 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
CPT1A-204ENST00000538994 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
CPT1A-204ENST00000538994 TRAF7Q6Q0C0 670 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 SYNE3Q6ZMZ3 975 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 RUFY3Q7L099 469 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 PHKBQ93100 1093 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 GPR20Q99678 358 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 ALG1Q9BT22 464 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
CPT1A-204ENST00000538994 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 REV3LO60673 3130 aa12.64□□□□□ -0.39
CPT1A-204ENST00000538994 FIBPO43427 364 aa12.63□□□□□ -0.39
CPT1A-204ENST00000538994 STAM2O75886 525 aa12.63□□□□□ -0.39
CPT1A-204ENST00000538994 LGALS2P05162 132 aa12.63□□□□□ -0.39
CPT1A-204ENST00000538994 HOXC8P31273 242 aa12.63□□□□□ -0.39
CPT1A-204ENST00000538994 NAPAP54920 295 aa12.63□□□□□ -0.39
CPT1A-204ENST00000538994 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
CPT1A-204ENST00000538994 PTPN11Q06124 597 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms