RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GAS7O60861 476 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ZBED4O75132 1171 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CCNE1P24864 410 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 SF3A3Q12874 501 aaKnown RBP eCLIP7.47□□□□□ -1.21
SORT1-209ENST00000538502 RESTQ13127 1097 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 GRAMD1BQ3KR37 738 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 NUGGCQ68CJ6 796 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 SLC30A9Q6PML9 568 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 AZI2Q9H6S1 392 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CCPG1Q9ULG6 757 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 H7C0C1 242 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CCDC22O60826 627 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 HSPD1P10809 573 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 IL2RBP14784 551 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ATP5OP48047 213 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CYP2J2P51589 502 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CDR2Q01850 454 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 KMT5BQ4FZB7 885 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 NSUN7Q8NE18 718 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 TBC1D22AQ8WUA7 517 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
SORT1-209ENST00000538502 MRGBPQ9NV56 204 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 HMGB3O15347 200 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 CCND1P24385 295 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ELF1P32519 619 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TECP42680 631 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ARHGDIAP52565 204 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CUL3Q13618 768 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PKP1Q13835 747 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TRIM60Q495X7 471 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TMCO4Q5TGY1 634 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ARL6IP4Q66PJ3 421 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 FAM178BQ8IXR5 827 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 DEPTORQ8TB45 409 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ANKRD7Q92527 254 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 LARP4BQ92615 738 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 LRRC37BQ96QE4 947 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 GCOM2Q9BZD3 368 aaPredicted RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 SLITRK6Q9H5Y7 841 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TLK1Q9UKI8 766 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 K7ENM7 598 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CIAO1O76071 339 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 HAUS5O94927 633 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 SERPINB2P05120 415 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 USP14P54578 494 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PTGDRQ13258 359 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 RARS2Q5T160 578 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 RAPH1Q70E73 1250 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 AGGF1Q8N302 714 aaeCLIP7.47□□□□□ -1.214e-10■■□□□ 12.9
SORT1-209ENST00000538502 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TEKT3Q9BXF9 490 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PLEKHA4Q9H4M7 779 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 GEMIN8Q9NWZ8 242 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 SEPT10Q9P0V9 454 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 KDM5CP41229 1560 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TIMM10P62072 90 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 IGBP1P78318 339 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 MESDQ14696 234 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 UBE3CQ15386 1083 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 CADPS2Q86UW7 1296 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ZBTB8OSQ8IWT0 167 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PALD1Q9ULE6 856 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 POTEB3A0JP26 581 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 KPNA7A9QM74 516 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 KRT37O76014 449 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 SYF2O95926 243 aaKnown RBP7.46□□□□□ -1.21
SORT1-209ENST00000538502 KRT10P13645 584 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 LIG4P49917 911 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 DMP1Q13316 513 aaPredicted RBP7.46□□□□□ -1.21
SORT1-209ENST00000538502 RESP18Q5W5W9 173 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 POTEBQ6S5H4 581 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 EXOC8Q8IYI6 725 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 MTRQ99707 1265 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 SENP1Q9P0U3 644 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 SEPT3Q9UH03 358 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 CAPN11Q9UMQ6 739 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 TAC1P20366 129 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 EIF4A3P38919 411 aaKnown RBP7.46□□□□□ -1.21
SORT1-209ENST00000538502 SLC1A4P43007 532 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 MRPS35P82673 323 aaKnown RBP7.46□□□□□ -1.21
SORT1-209ENST00000538502 SLC39A6Q13433 755 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.21
SORT1-209ENST00000538502 KLC3Q6P597 504 aa7.46□□□□□ -1.21
SORT1-209ENST00000538502 ZNF790Q6PG37 636 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms