RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 GHRHRQ02643 423 aa22.57■■□□□ 1.2
TULP3-203ENST00000538354 CCDC85BQ15834 202 aaPredicted RBP22.57■■□□□ 1.2
TULP3-203ENST00000538354 NFXL1Q6ZNB6 911 aa22.57■■□□□ 1.2
TULP3-203ENST00000538354 GPKOWQ92917 476 aaPredicted RBP eCLIP22.57■■□□□ 1.2
TULP3-203ENST00000538354 JAKMIP1Q96N16 626 aaKnown RBP22.57■■□□□ 1.2
TULP3-203ENST00000538354 MYL10Q9BUA6 226 aa22.57■■□□□ 1.2
TULP3-203ENST00000538354 LRRC2Q9BYS8 371 aa22.57■■□□□ 1.2
TULP3-203ENST00000538354 FTOQ9C0B1 505 aaKnown RBP eCLIP22.57■■□□□ 1.2
TULP3-203ENST00000538354 CCDC69A6NI79 296 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 PITPNM1O00562 1244 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 PFKMP08237 780 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 PSEN2P49810 448 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 BFSP2Q13515 415 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 PGM5Q15124 567 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 DGKDQ16760 1214 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 PPP2R2DQ66LE6 453 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 DHX37Q8IY37 1157 aaKnown RBP22.56■■□□□ 1.2
TULP3-203ENST00000538354 DHX38Q92620 1227 aaKnown RBP22.56■■□□□ 1.2
TULP3-203ENST00000538354 HDAC6Q9UBN7 1215 aa22.56■■□□□ 1.2
TULP3-203ENST00000538354 GCOM1H8Y6P7 765 aaPredicted RBP22.55■■□□□ 1.2
TULP3-203ENST00000538354 POLR2MP0CAP2 368 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 CALM1P0DP23 149 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 CALM2P0DP24 149 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 CALM3P0DP25 149 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 KIF5BP33176 963 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 PCDHA11Q9Y5I1 949 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 SLC12A7Q9Y666 1083 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 PTPRSQ13332 1948 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 VCANP13611 3396 aa22.55■■□□□ 1.2
TULP3-203ENST00000538354 DOCK5Q9H7D0 1870 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 PSMA5P28066 241 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 RFC2P35250 354 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 SP2Q02086 613 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 LAMC2Q13753 1193 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 MFSD10Q14728 455 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 BLOC1S2Q6QNY1 142 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 VSIG10LQ86VR7 867 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 CTCFLQ8NI51 663 aaPredicted RBP22.54■■□□□ 1.2
TULP3-203ENST00000538354 EMID1Q96A84 441 aaPredicted RBP22.54■■□□□ 1.2
TULP3-203ENST00000538354 TCEANC2Q96MN5 208 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 BCAS3Q9H6U6 928 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 CERS4Q9HA82 394 aa22.54■■□□□ 1.2
TULP3-203ENST00000538354 PNMA6FA0A0J9YX94 578 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 GGPS1O95749 300 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 ACTN1P12814 892 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 ZNF200P98182 395 aaPredicted RBP22.53■■□□□ 1.2
TULP3-203ENST00000538354 GPNMBQ14956 572 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 KIAA0753Q2KHM9 967 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 SESTD1Q86VW0 696 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 FBXL16Q8N461 479 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 C7orf31Q8N865 590 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 PPTC7Q8NI37 304 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 GTF2IRD1Q9UHL9 959 aa22.53■■□□□ 1.2
TULP3-203ENST00000538354 RFXAPO00287 272 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 ARHGEF15O94989 841 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 CA3P07451 260 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 UBA1P22314 1058 aaKnown RBP22.52■■□□□ 1.2
TULP3-203ENST00000538354 SMARCA1P28370 1054 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 CCND2P30279 289 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 GNAQP50148 359 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 HIC1Q14526 733 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 HSDL1Q3SXM5 330 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 CELF3Q5SZQ8 465 aaKnown RBP22.52■■□□□ 1.2
TULP3-203ENST00000538354 MYSM1Q5VVJ2 828 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 WNT8BQ93098 351 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 SPATA33Q96N06 139 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 LZTS2Q9BRK4 669 aa22.52■■□□□ 1.2
TULP3-203ENST00000538354 MAP3K20Q9NYL2 800 aaKnown RBP22.52■■□□□ 1.2
TULP3-203ENST00000538354 F2P00734 622 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 RPS6KB1P23443 525 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 TCTN1Q2MV58 587 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 APOA5Q6Q788 366 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 SYNE3Q6ZMZ3 975 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 TMCO2Q7Z6W1 182 aaPredicted RBP22.51■■□□□ 1.19
TULP3-203ENST00000538354 RAB11FIP4Q86YS3 637 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 MICALL1Q8N3F8 863 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 CCDC155Q8N6L0 562 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 CAGE1Q8TC20 777 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 AFAP1L1Q8TED9 768 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 SPZ1Q9BXG8 430 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 TM6SF1Q9BZW5 370 aa22.51■■□□□ 1.19
TULP3-203ENST00000538354 HAS3O00219 553 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 CPA1P15085 419 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 SELPP16109 830 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 RXRAP19793 462 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 LRRC8DQ7L1W4 858 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 FANCBQ8NB91 859 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 SLC9A7Q96T83 725 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 ZSWIM6Q9HCJ5 1215 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 RTEL1Q9NZ71 1219 aa22.5■■□□□ 1.19
TULP3-203ENST00000538354 SPTBN5Q9NRC6 3674 aaKnown RBP22.5■■□□□ 1.19
TULP3-203ENST00000538354 PLEKHA8P1O95397 391 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 CKBP12277 381 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 RCAN1P53805 252 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 MRPS9P82933 396 aaKnown RBP22.49■■□□□ 1.19
TULP3-203ENST00000538354 FGD1P98174 961 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 TRAF1Q13077 416 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 SPRED2Q7Z698 418 aa22.49■■□□□ 1.19
TULP3-203ENST00000538354 CMTR1Q8N1G2 835 aaKnown RBP22.49■■□□□ 1.19
TULP3-203ENST00000538354 SAMD3Q8N6K7 520 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms