RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ST3GAL1Q11201 340 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 TRAF1Q13077 416 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 ITGA7Q13683 1181 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 NPY5RQ15761 445 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 HSDL1Q3SXM5 330 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 CELF3Q5SZQ8 465 aaKnown RBP9.67□□□□□ -0.86
SPARC-208ENST00000538026 C16orf59Q7L2K0 433 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 CRYGNQ8WXF5 182 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 BADQ92934 168 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 ZNF274Q96GC6 653 aaPredicted RBP9.67□□□□□ -0.86
SPARC-208ENST00000538026 AIFM3Q96NN9 605 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 RIC8AQ9NPQ8 531 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 NAP1L2Q9ULW6 460 aaPredicted RBP9.67□□□□□ -0.86
SPARC-208ENST00000538026 PCDHA6Q9UN73 950 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 PCDHA8Q9Y5H6 950 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 UMODL1Q5DID0 1318 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 A0A0U1RQG5 324 aaPredicted RBP9.66□□□□□ -0.86
SPARC-208ENST00000538026 SMCO2A6NFE2 343 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 B4DLN1 442 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 B4GALT4O60513 344 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 GH1P01241 217 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 MYL3P08590 195 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 SCG2P13521 617 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 MRPL12P52815 198 aaKnown RBP9.66□□□□□ -0.86
SPARC-208ENST00000538026 AK2P54819 239 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 NAPAP54920 295 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 FGD1P98174 961 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 SCRN1Q12765 414 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 C9orf50Q5SZB4 431 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 SMARCC2Q8TAQ2 1214 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 MTG1Q9BT17 334 aaPredicted RBP9.66□□□□□ -0.86
SPARC-208ENST00000538026 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
SPARC-208ENST00000538026 TRMT13Q9NUP7 481 aaKnown RBP9.66□□□□□ -0.86
SPARC-208ENST00000538026 UBIAD1Q9Y5Z9 338 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 MRVI1Q9Y6F6 885 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 WDR81Q562E7 1941 aa9.66□□□□□ -0.86
SPARC-208ENST00000538026 HAS3O00219 553 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 CABYRO75952 493 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 GGPS1O95749 300 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 TGFB3P10600 412 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 KCNA2P16389 499 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 CPT1AP50416 773 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 STK3Q13188 491 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 LAMC2Q13753 1193 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 ME3Q16798 604 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 NECAB1Q8N987 351 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 RASGRP4Q8TDF6 673 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 CUL5Q93034 780 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 VTI1AQ96AJ9 217 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 MPHOSPH6Q99547 160 aaKnown RBP9.65□□□□□ -0.86
SPARC-208ENST00000538026 C16orf70Q9BSU1 422 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 SLC26A6Q9BXS9 759 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 RNF26Q9BY78 433 aaPredicted RBP9.65□□□□□ -0.86
SPARC-208ENST00000538026 ZMYND12Q9H0C1 365 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 TMEM39AQ9NV64 488 aa9.65□□□□□ -0.86
SPARC-208ENST00000538026 KAT6AQ92794 2004 aa9.65□□□□□ -0.87
SPARC-208ENST00000538026 CCDC196A0A1B0GTZ2 297 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 ESYT2A0FGR8 921 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 M0R2N6 131 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 PFKFB2O60825 505 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 TIMP1P01033 207 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 ZNF286BP0CG31 522 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 ARP10275 920 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 CYP2C9P11712 490 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 FDPSP14324 419 aaKnown RBP9.64□□□□□ -0.87
SPARC-208ENST00000538026 CYP2C18P33260 490 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 ZNF200P98182 395 aaPredicted RBP9.64□□□□□ -0.87
SPARC-208ENST00000538026 GPNMBQ14956 572 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 SHHQ15465 462 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 JAKMIP3Q5VZ66 844 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 XRRA1Q6P2D8 792 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
SPARC-208ENST00000538026 WNT8BQ93098 351 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 NOC4LQ9BVI4 516 aaKnown RBP9.64□□□□□ -0.87
SPARC-208ENST00000538026 ANO3Q9BYT9 981 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 JADE2Q9NQC1 790 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 VPS54Q9P1Q0 977 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
SPARC-208ENST00000538026 GSTTP1A0A1W2PQM5 241 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 DCDC2CA8MYV0 355 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 FAM86B1E9PN63 330 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 MEIS1O00470 390 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 FIBPO43427 364 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 ZEB2O60315 1214 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 KPNA6O60684 536 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 PPFIA4O75335 1185 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 STAM2O75886 525 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 F2P00734 622 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 FAM86B2P0C5J1 330 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 SREBF1P36956 1147 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms