RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
RTN3-208ENST00000537981 MAF1Q9H063 256 aa11.73□□□□□ -0.53
RTN3-208ENST00000537981 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
RTN3-208ENST00000537981 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
RTN3-208ENST00000537981 HYOU1Q9Y4L1 999 aa11.73□□□□□ -0.53
RTN3-208ENST00000537981 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 BCL9LQ86UU0 1499 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 GM2AP17900 193 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
RTN3-208ENST00000537981 IFNAR2P48551 515 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 KRT83P78385 493 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 ARL10Q8N8L6 244 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 CCHCR1Q8TD31 782 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 GIPC2Q8TF65 315 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 ZFAND2BQ8WV99 257 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
RTN3-208ENST00000537981 OSBP2Q969R2 916 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 MTRQ99707 1265 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 HAUS7Q99871 368 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 DSCC1Q9BVC3 393 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 FBXL5Q9UKA1 691 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 CAPN11Q9UMQ6 739 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
RTN3-208ENST00000537981 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
RTN3-208ENST00000537981 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 GRM8O00222 908 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 PAEPP09466 180 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 CHN1P15882 459 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 POLD1P28340 1107 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 MEA1Q16626 185 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 ERMARDQ5T6L9 678 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 MEX3CQ5U5Q3 659 aaKnown RBP11.71□□□□□ -0.53
RTN3-208ENST00000537981 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 NELFBQ8WX92 580 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 UTP4Q969X6 686 aaKnown RBP11.71□□□□□ -0.53
RTN3-208ENST00000537981 XDHP47989 1333 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 EPHB6O15197 1021 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 NPTXRO95502 500 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 FTCDO95954 541 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
RTN3-208ENST00000537981 PCK1P35558 622 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 MSH2P43246 934 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
RTN3-208ENST00000537981 ITIH3Q06033 890 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 EARS2Q5JPH6 523 aaKnown RBP11.71□□□□□ -0.53
RTN3-208ENST00000537981 OR52E8Q6IFG1 317 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 CCNJLQ8IV13 435 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 MKL1Q969V6 931 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 RHBDL2Q9NX52 303 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 GALNT8Q9NY28 637 aa11.71□□□□□ -0.53
RTN3-208ENST00000537981 PRR36Q9H6K5 1346 aa11.71□□□□□ -0.54
RTN3-208ENST00000537981 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 H0Y3Z8 333 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 KIF5BP33176 963 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 RASSF7Q02833 373 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 KLHDC7AQ5VTJ3 777 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 PIGWQ7Z7B1 504 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 ARFGAP2Q8N6H7 521 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 SUPT20HQ8NEM7 779 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 ZNF507Q8TCN5 953 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 LPIN2Q92539 896 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 KIFAP3Q92845 792 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 IFT43Q96FT9 208 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 FAM129AQ9BZQ8 928 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 STK36Q9NRP7 1315 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 FGAP02671 866 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 MMEP08473 750 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 GNAZP19086 355 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTN3-208ENST00000537981 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 PLS1Q14651 629 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 NTRK3Q16288 839 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 DIS3L2Q8IYB7 885 aaKnown RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 MAIP1Q8WWC4 291 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 ATXN2LQ8WWM7 1075 aaKnown RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 ADAM7Q9H2U9 754 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 SUDS3Q9H7L9 328 aaPredicted RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
RTN3-208ENST00000537981 ARHGAP20Q9P2F6 1191 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 MYH4Q9Y623 1939 aa11.7□□□□□ -0.54
RTN3-208ENST00000537981 TOM1O60784 492 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 TACC1O75410 805 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 TRIM21P19474 475 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms