RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 GDF15Q99988 308 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 DHX36Q9H2U1 1008 aaKnown RBP6.54□□□□□ -1.36
SNHG1-207ENST00000537965 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 COPRSQ9NQ92 184 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 TMOD4Q9NZQ9 345 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 KANSL3Q9P2N6 904 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 PI4KBQ9UBF8 816 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 PPME1Q9Y570 386 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-207ENST00000537965 FRMPD3Q5JV73 1810 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 MYH8P13535 1937 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 ATRNL1Q5VV63 1379 aa6.54□□□□□ -1.36
SNHG1-207ENST00000537965 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 MROH7-TTC4A0A0A0MT08 1334 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 LAMA2P24043 3122 aaKnown RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 GLRX3O76003 335 aaKnown RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 BAG3O95817 575 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 ASNSP08243 561 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 GNAI3P08754 354 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 MAPK4P31152 587 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 HOXA7P31268 230 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 RASGRF1Q13972 1273 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 PDE3AQ14432 1141 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 SETDB1Q15047 1291 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 ATF7IPQ6VMQ6 1270 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 C7orf61Q8IZ16 206 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 TDHQ8IZJ6 230 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 DEFB123Q8N688 67 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 WDR18Q9BV38 432 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 API5Q9BZZ5 524 aaKnown RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 ASCC2Q9H1I8 757 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-207ENST00000537965 C11orf49Q9H6J7 331 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 TPSG1Q9NRR2 321 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 SMC4Q9NTJ3 1288 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 MORF4L1Q9UBU8 362 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 OGDHLQ9ULD0 1010 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 STXBP5LQ9Y2K9 1186 aa6.53□□□□□ -1.36
SNHG1-207ENST00000537965 ZNF521Q96K83 1311 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 A0A1B0GUL7 405 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 H3BRB1 525 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 UQCRFS1P1P0C7P4 283 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 CDC27P30260 824 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 HMGCS2P54868 508 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 RHBDL3P58872 404 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 TIMM10P62072 90 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 MECOMQ03112 1051 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 TREML2Q5T2D2 321 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 GLYCTKQ8IVS8 523 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 GPRC5AQ8NFJ5 357 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 NEUROD6Q96NK8 337 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 POP1Q99575 1024 aaKnown RBP6.52□□□□□ -1.37
SNHG1-207ENST00000537965 LACRTQ9GZZ8 138 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 TUT1Q9H6E5 874 aaKnown RBP6.52□□□□□ -1.37
SNHG1-207ENST00000537965 CWC22Q9HCG8 908 aaKnown RBP6.52□□□□□ -1.37
SNHG1-207ENST00000537965 DDX4Q9NQI0 724 aaKnown RBP6.52□□□□□ -1.37
SNHG1-207ENST00000537965 LRP2BPQ9P2M1 347 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 GJD2Q9UKL4 321 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 NCOR1O75376 2440 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 RFX7Q2KHR2 1363 aa6.52□□□□□ -1.37
SNHG1-207ENST00000537965 LAMA3Q16787 3333 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 RLFQ13129 1914 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 SOX1O00570 391 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 MSCO60682 206 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 PHACTR2O75167 634 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 CYP2B6P20813 491 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 RGS2P41220 211 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 BACE1P56817 501 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 CCNA1P78396 465 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 ARHGAP4P98171 946 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 SLFN5Q08AF3 891 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 G3BP1Q13283 466 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 NKAPLQ5M9Q1 402 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 MAP3K21Q5TCX8 1036 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 CERS3Q8IU89 383 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 TEX11Q8IYF3 940 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 SNX29Q8TEQ0 813 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 NSUN4Q96CB9 384 aaKnown RBP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 LBHD1Q9BQE6 289 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 DZANK1Q9NVP4 752 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 RAI14Q9P0K7 980 aa6.51□□□□□ -1.37
SNHG1-207ENST00000537965 ZMYND8Q9ULU4 1186 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-207ENST00000537965 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 LINC01387J3KSC0 135 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 EREGO14944 169 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 IPO8O15397 1037 aaKnown RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 SRGAP3O43295 1099 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 HLA-DOAP06340 250 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 ZKSCAN1P17029 563 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 ADORA1P30542 326 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 MAGEA10P43363 369 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 HERVK_113P62684 666 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 TFCP2Q12800 502 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 MTX1Q13505 466 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms