RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 L3MBTL1Q9Y468 752 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 A0A1W2PQC6 194 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 TACC1O75410 805 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 BBOX1O75936 387 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 UFL1O94874 794 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 DPYDQ12882 1025 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 UBE3CQ15386 1083 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 NCOA7Q8NI08 942 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 NDST4Q9H3R1 872 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 HYOU1Q9Y4L1 999 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 LUC7L3O95232 432 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 GLI1P08151 1106 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 ALADP13716 330 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 AFMP43652 599 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 METAP2P50579 478 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 ROR2Q01974 943 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 MAATS1Q7Z4T9 603 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 PLAAQ9Y263 795 aa12.5□□□□□ -0.41
SEMA4D-221ENST00000537934 GCOM1H8Y6P7 765 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 AGAP11Q8TF27 550 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 RAPGEF5Q92565 580 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 PLCB1Q9NQ66 1216 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 POLLQ9UGP5 575 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 CLTAP09496 248 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 NPR1P16066 1061 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 BIRC3Q13489 604 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 CACNA1SQ13698 1873 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 PHKBQ93100 1093 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 EPB41L5Q9HCM4 733 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 RBM12Q9NTZ6 932 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
SEMA4D-221ENST00000537934 ORC4O43929 436 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 DIAPH2O60879 1101 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 COQ9O75208 318 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 CDC25CP30307 473 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 CHRNA5P30532 468 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 HAND2P61296 217 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 CPLX4Q7Z7G2 160 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 RALYLQ86SE5 291 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 ALS2CR12Q96Q35 445 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 COBLO75128 1261 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 DRD4P21917 467 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 CCND1P24385 295 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 GUCY2DQ02846 1103 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 ZNF384Q8TF68 577 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 TSC22D3Q99576 134 aa12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 MOV10L1Q9BXT6 1211 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-221ENST00000537934 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 MBD4O95243 580 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 FGAP02671 866 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 ATP4AP20648 1035 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 TMOD1P28289 359 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 CASP1P29466 404 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 PAK1Q13153 545 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 TEX9Q8N6V9 391 aa12.47□□□□□ -0.41
SEMA4D-221ENST00000537934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■■■■ 46.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms