RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 RSPH14Q9UHP6 348 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 GOLGA6BA6NDN3 693 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 TCP1P17987 556 aaKnown RBP20.69■□□□□ 0.9
CHPF-203ENST00000535926 RFC4P35249 363 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 CERS3Q8IU89 383 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 MS4A14Q96JA4 679 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 JMJD4Q9H9V9 463 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 RIC8AQ9NPQ8 531 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 TBC1D7Q9P0N9 293 aa20.69■□□□□ 0.9
CHPF-203ENST00000535926 COASYQ13057 564 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 PSMD2Q13200 908 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 HAUS3Q68CZ6 603 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 ALS2CR12Q96Q35 445 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 hCG_1984214I3L0E3 225 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 SNHG28P0DPA3 235 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 PLCG2P16885 1265 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
CHPF-203ENST00000535926 PICALMQ13492 652 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 TTBK2Q6IQ55 1244 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 CCDC70Q6NSX1 233 aa20.68■□□□□ 0.9
CHPF-203ENST00000535926 ZNF713Q8N859 430 aaPredicted RBP20.68■□□□□ 0.9
CHPF-203ENST00000535926 TRAF5O00463 557 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 SLC20A2Q08357 652 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 ADGRF4Q8IZF3 695 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 TSPYL1Q9H0U9 437 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 RBM12Q9NTZ6 932 aaKnown RBP20.67■□□□□ 0.9
CHPF-203ENST00000535926 COL4A3BPQ9Y5P4 624 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 MYH10P35580 1976 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 FKBP3Q00688 224 aaKnown RBP20.67■□□□□ 0.9
CHPF-203ENST00000535926 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 PPP4R3AQ6IN85 833 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 TSG101Q99816 390 aa20.67■□□□□ 0.9
CHPF-203ENST00000535926 DDX25Q9UHL0 483 aaKnown RBP20.67■□□□□ 0.9
CHPF-203ENST00000535926 GAKO14976 1311 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 SSU72P8A0A1W2PR75 194 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 ANKRD65E5RJM6 399 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 CLK2P49760 499 aaKnown RBP20.66■□□□□ 0.9
CHPF-203ENST00000535926 GABPAQ06546 454 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 SKIDA1Q1XH10 827 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 TDRD12Q587J7 1177 aaKnown RBP20.66■□□□□ 0.9
CHPF-203ENST00000535926 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 DPP8Q6V1X1 898 aaPredicted RBP20.66■□□□□ 0.9
CHPF-203ENST00000535926 RASSF4Q9H2L5 321 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 POLLQ9UGP5 575 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 CCDC181Q5TID7 509 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 TSEN2Q8NCE0 465 aaKnown RBP20.66■□□□□ 0.9
CHPF-203ENST00000535926 EDEM3Q9BZQ6 932 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 GGA1Q9UJY5 639 aa20.66■□□□□ 0.9
CHPF-203ENST00000535926 CDK5RAP2Q96SN8 1893 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 NPHP3-ACAD11A0A0J9YXS1 232 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 E9PMD0 336 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 RBAK-RBAKDNI3L0D1 243 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 SSBP05455 408 aaKnown RBP eCLIP20.65■□□□□ 0.9
CHPF-203ENST00000535926 SLC16A2P36021 539 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 CACNB1Q02641 598 aaPredicted RBP20.65■□□□□ 0.9
CHPF-203ENST00000535926 PROM2Q8N271 834 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 RPGRQ92834 1020 aaKnown RBP20.65■□□□□ 0.9
CHPF-203ENST00000535926 NOX5Q96PH1 765 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 STIM2Q9P246 746 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 DAGLAQ9Y4D2 1042 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 IGKV6D-41A0A0C4DH26 115 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 GOLGA6CA6NDK9 693 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 GOLGA6DP0CG33 693 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 NAP1L1P55209 391 aaKnown RBP20.65■□□□□ 0.9
CHPF-203ENST00000535926 CCDC40Q4G0X9 1142 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 FAM26FQ5R3K3 315 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 NELFCDQ8IXH7 590 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 GOLGA6AQ9NYA3 693 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 PCDHA2Q9Y5H9 948 aa20.65■□□□□ 0.9
CHPF-203ENST00000535926 ATP2B4P23634 1241 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 POLR2FP61218 127 aaKnown RBP20.64■□□□□ 0.9
CHPF-203ENST00000535926 FAM76AQ8TAV0 307 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 TRIM34Q9BYJ4 488 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 LRRC27Q9C0I9 530 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 CEP72Q9P209 647 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 PCDHA12Q9UN75 941 aa20.64■□□□□ 0.9
CHPF-203ENST00000535926 SHOX2O60902 331 aaPredicted RBP20.64■□□□□ 0.89
CHPF-203ENST00000535926 PPFIA4O75335 1185 aa20.64■□□□□ 0.89
CHPF-203ENST00000535926 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
CHPF-203ENST00000535926 FOXR2Q6PJQ5 311 aa20.64■□□□□ 0.89
CHPF-203ENST00000535926 RNF10Q8N5U6 811 aaKnown RBP20.64■□□□□ 0.89
CHPF-203ENST00000535926 LSM14BQ9BX40 385 aaKnown RBP20.64■□□□□ 0.89
CHPF-203ENST00000535926 DDX4Q9NQI0 724 aaKnown RBP20.64■□□□□ 0.89
CHPF-203ENST00000535926 SLURP2P0DP57 97 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 PAFAH1B1P43034 410 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 SLC9C1Q4G0N8 1177 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 SFMBT2Q5VUG0 894 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 EHD4Q9H223 541 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 KIAA1024Q9UPX6 916 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 DNA2P51530 1060 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 FAM196AQ6ZSG2 479 aa20.63■□□□□ 0.89
CHPF-203ENST00000535926 TBC1D5Q92609 795 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms