RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 QRICH1Q2TAL8 776 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 ZNF589Q86UQ0 364 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 TBC1D10CQ8IV04 446 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 ADGRF4Q8IZF3 695 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 PPTC7Q8NI37 304 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 WNT8BQ93098 351 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 SPATA33Q96N06 139 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 YME1L1Q96TA2 773 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 CTNNA3Q9UI47 895 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 ZNF213O14771 459 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 KDM4AO75164 1064 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 UPP2O95045 317 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 NR3C2P08235 984 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 PUS10Q3MIT2 529 aaKnown RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 TIGD5Q53EQ6 642 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 DBF4BQ8NFT6 615 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 MRPL38Q96DV4 380 aaKnown RBP9.37□□□□□ -0.91
CHFR-211ENST00000535897 MAF1Q9H063 256 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 PXMP2Q9NR77 195 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 MICAL3Q7RTP6 2002 aa9.37□□□□□ -0.91
CHFR-211ENST00000535897 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 GRXCR2A6NFK2 248 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 PPFIA4O75335 1185 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 GGPS1O95749 300 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 CTSHP09668 335 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 PDE1AP54750 535 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 GPM6BQ13491 265 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 TRIM71Q2Q1W2 868 aaKnown RBP9.36□□□□□ -0.91
CHFR-211ENST00000535897 HSDL1Q3SXM5 330 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 EPC2Q52LR7 807 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 CCDC178Q5BJE1 867 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 KCNV1Q6PIU1 500 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 SERINC5Q86VE9 423 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 BANK1Q8NDB2 785 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 SEPT8Q92599 483 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 ATP6V0A1Q93050 837 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 SAMD11Q96NU1 681 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 ZSCAN10Q96SZ4 725 aaPredicted RBP9.36□□□□□ -0.91
CHFR-211ENST00000535897 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 JMJD4Q9H9V9 463 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
CHFR-211ENST00000535897 LAMA4Q16363 1823 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 B4E1Z4 1266 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 HAS3O00219 553 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 NOP56O00567 594 aaKnown RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 DCXO43602 365 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 HOXA13P31271 388 aaPredicted RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 HTRA4P83105 476 aaPredicted RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 HIC1Q14526 733 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 TCEAL5Q5H9L2 206 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 CELF3Q5SZQ8 465 aaKnown RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 UBAC1Q9BSL1 405 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 IFIH1Q9BYX4 1025 aaKnown RBP9.35□□□□□ -0.91
CHFR-211ENST00000535897 CLDND1Q9NY35 253 aa9.35□□□□□ -0.91
CHFR-211ENST00000535897 H3BNC9 293 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 H3BRB1 525 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 CSPG5O95196 566 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 SMIM10L2AP0DMW4 78 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 SMIM10L2BP0DMW5 78 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 CCND2P30279 289 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 CTNNB1P35222 781 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 HSD17B4P51659 736 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 CLUL1Q15846 466 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 PLEKHG4Q58EX7 1191 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 FCHSD1Q86WN1 690 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
CHFR-211ENST00000535897 NEK9Q8TD19 979 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 PABPC5Q96DU9 382 aaKnown RBP9.34□□□□□ -0.91
CHFR-211ENST00000535897 PDCD2LQ9BRP1 358 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 NSUN3Q9H649 340 aaKnown RBP9.34□□□□□ -0.91
CHFR-211ENST00000535897 TUT1Q9H6E5 874 aaKnown RBP9.34□□□□□ -0.91
CHFR-211ENST00000535897 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 WDFY4Q6ZS81 3184 aa9.34□□□□□ -0.91
CHFR-211ENST00000535897 TRIOO75962 3097 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms