RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 RUFY1Q96T51 708 aa11.34□□□□□ -0.59
DDB1-204ENST00000535147 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
DDB1-204ENST00000535147 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
DDB1-204ENST00000535147 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.59
DDB1-204ENST00000535147 PJA2O43164 708 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 PALMO75781 387 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 SSBP05455 408 aaKnown RBP eCLIP11.33□□□□□ -0.59
DDB1-204ENST00000535147 TM4SF1P30408 202 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 NFIXQ14938 502 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 EMBQ6PCB8 327 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 PTF1AQ7RTS3 328 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 RAD54LQ92698 747 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 EPB41L5Q9HCM4 733 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.59
DDB1-204ENST00000535147 CCDC88AQ3V6T2 1871 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 IRS2Q9Y4H2 1338 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 GOLGA8KD6RF30 607 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 TRAF5O00463 557 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 EBAG9O00559 213 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 OPA1O60313 960 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 HSF2BPO75031 334 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 NOL4O94818 638 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 KLRC1P26715 233 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 POLR2FP61218 127 aaKnown RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 GUCY2DQ02846 1103 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 PPARDQ03181 441 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 STK17AQ9UEE5 414 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 HEXIM1O94992 359 aaKnown RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 BTDP43251 543 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 TNNI2P48788 182 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 CFAP221Q4G0U5 840 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 DNAAF5Q86Y56 855 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 TBC1D5Q92609 795 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 PACSIN1Q9BY11 444 aa11.33□□□□□ -0.6
DDB1-204ENST00000535147 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
DDB1-204ENST00000535147 COL14A1Q05707 1796 aaKnown RBP11.32□□□□□ -0.6
DDB1-204ENST00000535147 RAD21O60216 631 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 ZEB2O60315 1214 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
DDB1-204ENST00000535147 EHHADHQ08426 723 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 NNTQ13423 1086 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 UBE2SQ16763 222 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 PTPROQ16827 1216 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 KRT79Q5XKE5 535 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 KRT12Q99456 494 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDB1-204ENST00000535147 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
DDB1-204ENST00000535147 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
DDB1-204ENST00000535147 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 A0A087X0T9 212 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 FAM228BP0C875 321 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■■■□□ 18.7
DDB1-204ENST00000535147 SLC9C1Q4G0N8 1177 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 SFMBT2Q5VUG0 894 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 ALS2CLQ60I27 953 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 LRRC47Q8N1G4 583 aaKnown RBP11.32□□□□□ -0.6
DDB1-204ENST00000535147 CAVIN3Q969G5 261 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 TSG101Q99816 390 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 GOLPH3Q9H4A6 298 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 COL4A3BPQ9Y5P4 624 aa11.32□□□□□ -0.6
DDB1-204ENST00000535147 A0A087WUV0 522 aaPredicted RBP11.31□□□□□ -0.6
DDB1-204ENST00000535147 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 PPP4CP60510 307 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 COASYQ13057 564 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 RAPGEF1Q13905 1077 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 C16orf86Q6ZW13 317 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 KAT2BQ92831 832 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 ADCY7P51828 1080 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 FKBP3Q00688 224 aaKnown RBP11.31□□□□□ -0.6
DDB1-204ENST00000535147 KIAA0753Q2KHM9 967 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 ZCWPW2Q504Y3 356 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 CFAP58Q5T655 872 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 ICE2Q659A1 982 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 GBP6Q6ZN66 633 aa11.31□□□□□ -0.6
DDB1-204ENST00000535147 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms