RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 WDR11Q9BZH6 1224 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 VAV3Q9UKW4 847 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PDHXO00330 501 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MYCLP12524 364 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ZNF165P49910 485 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 DPYDQ12882 1025 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ECM1Q16610 540 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SLC5A5Q92911 643 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BLZF1Q9H2G9 400 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CBX8Q9HC52 389 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 UBIAD1Q9Y5Z9 338 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ERCC3P19447 782 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NLRP12P59046 1061 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NCAPH2Q6IBW4 605 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ANKRD35Q8N283 1001 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 GPBP1L1Q9HC44 474 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 FBXO40Q9UH90 709 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MAN1B1Q9UKM7 699 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PNMA3Q9UL41 463 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PSMD10O75832 226 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 LRCH2Q5VUJ6 765 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 LUZP1Q86V48 1076 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CDK5RAP3Q96JB5 506 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ZNF577Q9BSK1 485 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 KCNH7Q9NS40 1196 aa22.85■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BMP6P22004 513 aa22.84■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CUL4BQ13620 913 aa22.84■■□□□ 1.25
TNFRSF1A-205ENST00000534885 FAM43AQ8N2R8 423 aa22.84■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NSUN6Q8TEA1 469 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1A-205ENST00000534885 KBTBD4Q9NVX7 518 aa22.84■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PASKQ96RG2 1323 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 IPO5O00410 1097 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NR3C2P08235 984 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BCRP11274 1271 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CCT6AP40227 531 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CNTN2Q02246 1040 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 TMEM119Q4V9L6 283 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NIPA1Q7RTP0 329 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 KCNK18Q7Z418 384 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MAF1Q9H063 256 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CUEDC2Q9H467 287 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 JADE2Q9NQC1 790 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BLOC1S4Q9NUP1 217 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SLC45A1Q9Y2W3 748 aa22.83■■□□□ 1.25
TNFRSF1A-205ENST00000534885 OTOP1Q7RTM1 612 aa22.83■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ANKRD23Q86SG2 305 aa22.83■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SAPCD2Q86UD0 394 aa22.83■■□□□ 1.24
TNFRSF1A-205ENST00000534885 PTPN18Q99952 460 aa22.83■■□□□ 1.24
TNFRSF1A-205ENST00000534885 PKD2L1Q9P0L9 805 aa22.83■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ASTN1O14525 1302 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 PFASO15067 1338 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 EML1O00423 815 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 GTPBP6O43824 516 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SMC2O95347 1197 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ERVK-9P63128 1117 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ERVK-24P63145 666 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 MTMR1Q13613 665 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 VSIG10LQ86VR7 867 aa22.82■■□□□ 1.24
TNFRSF1A-205ENST00000534885 POTEB3A0JP26 581 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 GAS7O60861 476 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 MED24O75448 989 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 CAVIN2O95810 425 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SLC25A27O95847 323 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 CCND2P30279 289 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ZNF157P51786 506 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 HYIQ5T013 277 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 POTEBQ6S5H4 581 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RASAL3Q86YV0 1011 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 STK17AQ9UEE5 414 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 KDM3AQ9Y4C1 1321 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 KIAA1217Q5T5P2 1943 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 TESPA1A2RU30 521 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 KIF3CO14782 793 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 CHMP2AO43633 222 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 PPP2R5CQ13362 524 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 MORC3Q14149 939 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 MAGEF1Q9HAY2 307 aa22.81■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DHX8Q14562 1220 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 IQCB1Q15051 598 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 HAUS3Q68CZ6 603 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 CATSPER3Q86XQ3 398 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 LARP4BQ92615 738 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 GSDMAQ96QA5 445 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 AGO4Q9HCK5 861 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 MCM6Q14566 821 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 PORCNQ9H237 461 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 UNC45AQ9H3U1 944 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 KIAA1024Q9UPX6 916 aa22.8■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DDX39AO00148 427 aaKnown RBP22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SPATA31C1P0DKV0 1188 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ITGB3BPQ13352 177 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 TRIML1Q8N9V2 468 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DNERQ8NFT8 737 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ERMNQ8TAM6 284 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RAD54LQ92698 747 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RIT2Q99578 217 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 TEKT3Q9BXF9 490 aa22.79■■□□□ 1.24
TNFRSF1A-205ENST00000534885 NT5C3AQ9H0P0 336 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms