RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PDCLQ13371 301 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 CCDC70Q6NSX1 233 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 ZKSCAN4Q969J2 545 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 BARHL2Q9NY43 387 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 NKRFO15226 690 aaKnown RBP eCLIP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 CMA1P23946 247 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 DPYDQ12882 1025 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 MTFR1LQ9H019 292 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 RIOX1Q9H6W3 641 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 KLC4Q9NSK0 619 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 LGR5O75473 907 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 ECEL1O95672 775 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 SLC3A2P08195 630 aaKnown RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 VSNL1P62760 191 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 MYO1EQ12965 1108 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PHLPP2Q6ZVD8 1323 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 POLR2DO15514 142 aaKnown RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 RAD21O60216 631 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PPP6R2O75170 966 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PLCG2P16885 1265 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 NLRP5P59047 1200 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 NCAPHQ15003 741 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 CCDC40Q4G0X9 1142 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 KCNG4Q8TDN1 519 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PLIN2Q99541 437 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 BAG1Q99933 345 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-216ENST00000534765 SLC37A4O43826 429 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 SNUPNO95149 360 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 FANCCQ00597 558 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 USP4Q13107 963 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 KCNB1Q14721 858 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 THEMIS2Q5TEJ8 643 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM68Q6AZZ1 485 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 B4GALNT4Q76KP1 1039 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 TBC1D5Q92609 795 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 FKBP1AP62942 108 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 MRPS25P82663 173 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 SMYD4Q8IYR2 804 aaPredicted RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 VWA3AA6NCI4 1184 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 PARP1P09874 1014 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM29Q14134 588 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 ZYXQ15942 572 aaKnown RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
SF3B2-216ENST00000534765 ODF2Q5BJF6 829 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 BLIDQ8IZY5 108 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 ZNRF3Q9ULT6 936 aa10□□□□□ -0.81
SF3B2-216ENST00000534765 SMIM24O75264 130 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TTLL1O95922 423 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SETSIPP0DME0 302 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CALM1P0DP23 149 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CALM2P0DP24 149 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CALM3P0DP25 149 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CD44P16070 742 aaKnown RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 HPDP32754 393 aaPredicted RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 NAALADL2Q58DX5 795 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CAPRIN2Q6IMN6 1127 aaKnown RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PNKPQ96T60 521 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 NUDT12Q9BQG2 462 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 MRIQ9BWK5 157 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PCDHA4Q9UN74 947 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PHIPQ8WWQ0 1821 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 GOLGA6BA6NDN3 693 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PEX10O60683 326 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 ATP1A3P13637 1013 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CDC25BP30305 580 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 ARHGAP25P42331 645 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 FMR1Q06787 632 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■□□□□ 11.1
SF3B2-216ENST00000534765 TBC1D10BQ4KMP7 808 aaPredicted RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 DALRD3Q5D0E6 543 aaKnown RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TTC38Q5R3I4 469 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 FAXDC2Q96IV6 333 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 WNK4Q96J92 1243 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SPZ1Q9BXG8 430 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 ZMYND12Q9H0C1 365 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SRPRBQ9Y5M8 271 aaKnown RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PARP14Q460N5 1801 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PHF20L1A8MW92 1017 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms