RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
NPIPA1-204ENST00000534720 RMND1Q9NWS8 449 aa7.33□□□□□ -1.24
NPIPA1-204ENST00000534720 STK17AQ9UEE5 414 aa7.33□□□□□ -1.24
NPIPA1-204ENST00000534720 PNMA2Q9UL42 364 aa7.33□□□□□ -1.24
NPIPA1-204ENST00000534720 ZNF536O15090 1300 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 MARCH6O60337 910 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 CFBP00751 764 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 TAL1P17542 331 aaPredicted RBP7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 VCAM1P19320 739 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 CASP1P29466 404 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 AMPD3Q01432 767 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 SPP2Q13103 211 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 MTMR2Q13614 643 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 KCNB1Q14721 858 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 PRAMEF18Q5VWM3 479 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 SAMD3Q8N6K7 520 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 STAMQ92783 540 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 ZKSCAN4Q969J2 545 aaPredicted RBP7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 BLZF1Q9H2G9 400 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 SLC38A10Q9HBR0 1119 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 PPP1R9AQ9ULJ8 1098 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 PCDHA12Q9UN75 941 aa7.32□□□□□ -1.24
NPIPA1-204ENST00000534720 A0A0G2JMZ2 1700 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 LCTP09848 1927 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 PPP1R3GB7ZBB8 358 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 USP2O75604 605 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 RPN1P04843 607 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 COL9A1P20849 921 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 HOXA13P31271 388 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CLCN1P35523 988 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 HSD17B4P51659 736 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 GHRHRQ02643 423 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 GRB10Q13322 594 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 HYIQ5T013 277 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZNF658Q5TYW1 1059 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ETNPPLQ8TBG4 499 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 LRRC15Q8TF66 581 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 TBC1D5Q92609 795 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CCDC102AQ96A19 550 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 DCPSQ96C86 337 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 FAM20AQ96MK3 541 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 PNMA5Q96PV4 448 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 PLIN2Q99541 437 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 C7orf25Q9BPX7 421 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 GTPBP4Q9BZE4 634 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 TANGO6Q9C0B7 1094 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 HSD3B7Q9H2F3 369 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 RPAP3Q9H6T3 665 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 MAP3K20Q9NYL2 800 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CCPG1Q9ULG6 757 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZKSCAN5Q9Y2L8 839 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 RABGAP1Q9Y3P9 1069 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZC3H4Q9UPT8 1303 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 KDM3AQ9Y4C1 1321 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 KLRC4O43908 158 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZBED4O75132 1171 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 FLOT1O75955 427 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 TMEM119Q4V9L6 283 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 USP50Q70EL3 339 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 SV2BQ7L1I2 683 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 MCF2L2Q86YR7 1114 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 SULF1Q8IWU6 871 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 DRC7Q8IY82 874 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 SNX29Q8TEQ0 813 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 LARP4BQ92615 738 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CCDC47Q96A33 483 aaKnown RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 LENG9Q96B70 501 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 AGBL1Q96MI9 1066 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 LRRC27Q9C0I9 530 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 NT5C3AQ9H0P0 336 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 BLOC1S4Q9NUP1 217 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 AFG3L2Q9Y4W6 797 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 CTDP1Q9Y5B0 961 aaPredicted RBP7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZHX2Q9Y6X8 837 aa7.31□□□□□ -1.24
NPIPA1-204ENST00000534720 ZNFX1Q9P2E3 1918 aaKnown RBP7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 IGLV3-22A0A075B6J6 115 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 FAM86B1E9PN63 330 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 CBFA2T2O43439 604 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 RHOBTB3O94955 611 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 FAM86B2P0C5J1 330 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 HOXA7P31268 230 aaPredicted RBP7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 ZNF76P36508 570 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 PRSS12P56730 875 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 FANCCQ00597 558 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 FMR1Q06787 632 aaKnown RBP eCLIP7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 DGKZQ13574 1117 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 PRR16Q569H4 304 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 CNNM4Q6P4Q7 775 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 CLEC4DQ8WXI8 215 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 RAD54LQ92698 747 aa7.3□□□□□ -1.24
NPIPA1-204ENST00000534720 KCNK17Q96T54 332 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms