RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 HPDP32754 393 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-206ENST00000534320 SNAP25P60880 206 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 KRT31Q15323 416 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 NCAPG2Q86XI2 1143 aa18.84■□□□□ 0.61
PHRF1-206ENST00000534320 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 CASQ2O14958 399 aaPredicted RBP18.83■□□□□ 0.61
PHRF1-206ENST00000534320 CASP1P29466 404 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 PSMC2P35998 433 aaKnown RBP18.83■□□□□ 0.61
PHRF1-206ENST00000534320 SLC8A3P57103 927 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 SHC4Q6S5L8 630 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 BARHL2Q9NY43 387 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 ASIC3Q9UHC3 531 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 AP3B2Q13367 1082 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 NEDD9Q14511 834 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 LONRF2Q1L5Z9 754 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 CIAPIN1Q6FI81 312 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 ZBTB8OSQ8IWT0 167 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 PPM1KQ8N3J5 372 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 PANX2Q96RD6 677 aa18.83■□□□□ 0.61
PHRF1-206ENST00000534320 BZW2Q9Y6E2 419 aaKnown RBP18.83■□□□□ 0.61
PHRF1-206ENST00000534320 PHLPP2Q6ZVD8 1323 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 AFPP02771 609 aaKnown RBP18.83■□□□□ 0.6
PHRF1-206ENST00000534320 NEDD1Q8NHV4 660 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 PDLIM2Q96JY6 352 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 TDRD3Q9H7E2 651 aaKnown RBP18.83■□□□□ 0.6
PHRF1-206ENST00000534320 C1orf112Q9NSG2 853 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 DLATP10515 647 aaKnown RBP18.83■□□□□ 0.6
PHRF1-206ENST00000534320 OAS2P29728 719 aaKnown RBP18.83■□□□□ 0.6
PHRF1-206ENST00000534320 POLGP54098 1239 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-206ENST00000534320 ANTXR2P58335 489 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 RASSF7Q02833 373 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 ARID5BQ14865 1188 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 CCDC105Q8IYK2 499 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 RAB3IL1Q8TBN0 382 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 ATP6V0A1Q93050 837 aa18.83■□□□□ 0.6
PHRF1-206ENST00000534320 DCCP43146 1447 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 ZNF354CQ86Y25 554 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 FAM186BQ8IYM0 893 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 CEP128Q6ZU80 1094 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 GDAP1L1Q96MZ0 367 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 ZBED6P86452 979 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 METTL13Q8N6R0 699 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 MYOM1P52179 1685 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 MYL7Q01449 175 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
PHRF1-206ENST00000534320 DDX41Q9UJV9 622 aaKnown RBP18.82■□□□□ 0.6
PHRF1-206ENST00000534320 PXDNQ92626 1479 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 GBP7Q8N8V2 638 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-206ENST00000534320 PLEKHA4Q9H4M7 779 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 PRPF6O94906 941 aaKnown RBP18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SLC17A8Q8NDX2 589 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 ACRBPQ8NEB7 543 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-206ENST00000534320 NRBP2Q9NSY0 501 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SALL3Q9BXA9 1300 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 LRRIQ4A6NIV6 560 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SNX16P57768 344 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 ZSCAN26Q16670 478 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 MAP7D1Q3KQU3 841 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 DALRD3Q5D0E6 543 aaKnown RBP18.81■□□□□ 0.6
PHRF1-206ENST00000534320 PPP1R18Q6NYC8 613 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SRGAP1Q7Z6B7 1085 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 CLIC2O15247 247 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 RUFY4Q6ZNE9 571 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
PHRF1-206ENST00000534320 SUGCTQ9HAC7 445 aa18.81■□□□□ 0.6
PHRF1-206ENST00000534320 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-206ENST00000534320 ZWINTO95229 277 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 TPD52P55327 224 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-206ENST00000534320 POTEMA6NI47 508 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L10C9JJH3 530 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 ATP5DP30049 168 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 PDE6CP51160 858 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 YWHAEP62258 255 aaKnown RBP18.8■□□□□ 0.6
PHRF1-206ENST00000534320 PTPROQ16827 1216 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 PRR5LQ6MZQ0 368 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 NDST4Q9H3R1 872 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 MYO3BQ8WXR4 1341 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 MST1RQ04912 1400 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 RICTORQ6R327 1708 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 ENC1O14682 589 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 ASNSP08243 561 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 STAG2Q8N3U4 1231 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 RAB17Q9H0T7 212 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 KRIT1O00522 736 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 DDIT3P35638 169 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 UNC13DQ70J99 1090 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
PHRF1-206ENST00000534320 SEPT9Q9UHD8 586 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms