RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 KIF18BQ86Y91 864 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 TRIM48Q8IWZ4 208 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 PPM1KQ8N3J5 372 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 FAM168AQ92567 244 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 SHISA4Q96DD7 197 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 NGRNQ9NPE2 291 aaKnown RBP4.74□□□□□ -1.65
CSMD3-210ENST00000534172 MARCH2Q9P0N8 246 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 GULP1Q9UBP9 304 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-210ENST00000534172 BLACEA4D250 179 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 RAPGEF3O95398 923 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 PDE6BP35913 854 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 MAPKAPK2P49137 400 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 ST5P78524 1137 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 ARHGAP44Q17R89 818 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 PLEKHO2Q8TD55 490 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 DPF3Q92784 378 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 PLCD4Q9BRC7 762 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 C19orf44Q9H6X5 657 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 PCDH18Q9HCL0 1135 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 TRIM39Q9HCM9 518 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 SLC52A1Q9NWF4 448 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 CD2APQ9Y5K6 639 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 DCAF1Q9Y4B6 1507 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 PEX10O60683 326 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 GLI4P10075 376 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 CRY1Q16526 586 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 EMC4Q5J8M3 183 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 MBLAC2Q68D91 279 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 WWC2Q6AWC2 1192 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 MPZL3Q6UWV2 235 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 BRAPQ7Z569 592 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 ZC3H7AQ8IWR0 971 aaKnown RBP4.73□□□□□ -1.65
CSMD3-210ENST00000534172 NLGN4XQ8N0W4 816 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 SLC7A14Q8TBB6 771 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
CSMD3-210ENST00000534172 DBR1Q9UK59 544 aaKnown RBP4.73□□□□□ -1.65
CSMD3-210ENST00000534172 RWDD3Q9Y3V2 267 aa4.73□□□□□ -1.65
CSMD3-210ENST00000534172 IQSEC2Q5JU85 1478 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 ARNTLO00327 626 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 CRTAMO95727 393 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 LCP1P13796 627 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 POU3F2P20265 443 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-210ENST00000534172 YBX1P67809 324 aaKnown RBP4.72□□□□□ -1.65
CSMD3-210ENST00000534172 C21orf62-AS1Q17RA5 79 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 HSP90AB2PQ58FF8 381 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 EP400NLQ6ZTU2 488 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 MAPRE3Q9UPY8 281 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 ATAD2BQ9ULI0 1458 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 TCRBV16S1A1N1A0A5B0 115 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 OPA1O60313 960 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 PAPLNO95428 1278 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 DBHP09172 617 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 GNAT1P11488 350 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 TRHRP34981 398 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-210ENST00000534172 SOX5P35711 763 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 KRT26Q7Z3Y9 468 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 TSPAN17Q96FV3 270 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 PSMD1Q99460 953 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 ORAI3Q9BRQ5 295 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 SMOC1Q9H4F8 434 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 ZNF552Q9H707 407 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-210ENST00000534172 BTG4Q9NY30 223 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 ZNF652Q9Y2D9 606 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 TRAF6Q9Y4K3 522 aa4.72□□□□□ -1.65
CSMD3-210ENST00000534172 HGSO14964 777 aaPredicted RBP4.71□□□□□ -1.65
CSMD3-210ENST00000534172 CPEP16870 476 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 RAB3GAP1Q15042 981 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 GPR19Q15760 415 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 TIGD5Q53EQ6 642 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 OTOP3Q7RTS5 596 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 FERMT3Q86UX7 667 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 JDP2Q8WYK2 163 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 DDX1Q92499 740 aaKnown RBP4.71□□□□□ -1.65
CSMD3-210ENST00000534172 CELF4Q9BZC1 486 aaKnown RBP4.71□□□□□ -1.65
CSMD3-210ENST00000534172 SLC6A20Q9NP91 592 aa4.71□□□□□ -1.65
CSMD3-210ENST00000534172 ASXL2Q76L83 1435 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 MSCO60682 206 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 LACTBP83111 547 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-210ENST00000534172 ADGRF1Q5T601 910 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 SCYL1Q96KG9 808 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 FAM126AQ9BYI3 521 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-210ENST00000534172 PDGFDQ9GZP0 370 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-210ENST00000534172 EPB41L4BQ9H329 900 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 CABP5Q9NP86 173 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 PCDHA9Q9Y5H5 950 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 PCDHA8Q9Y5H6 950 aa4.71□□□□□ -1.66
CSMD3-210ENST00000534172 PPP1R11O60927 126 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-210ENST00000534172 MSL3P1P0C860 447 aa4.7□□□□□ -1.66
CSMD3-210ENST00000534172 TAL1P17542 331 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-210ENST00000534172 EVA1CP58658 441 aa4.7□□□□□ -1.66
CSMD3-210ENST00000534172 TARBP2Q15633 366 aaKnown RBP4.7□□□□□ -1.66
CSMD3-210ENST00000534172 HABP4Q5JVS0 413 aaKnown RBP4.7□□□□□ -1.66
CSMD3-210ENST00000534172 ODR4Q5SWX8 454 aa4.7□□□□□ -1.66
CSMD3-210ENST00000534172 FYB2Q5VWT5 728 aa4.7□□□□□ -1.66
CSMD3-210ENST00000534172 ZCCHC8Q6NZY4 707 aaKnown RBP4.7□□□□□ -1.66
CSMD3-210ENST00000534172 ZC3H14Q6PJT7 736 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms