RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
CAPN5-207ENST00000533889 SLC12A7Q9Y666 1083 aa20.26■□□□□ 0.83
CAPN5-207ENST00000533889 CDH23Q9H251 3354 aa20.26■□□□□ 0.83
CAPN5-207ENST00000533889 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 LIFRP42702 1097 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 RABGGTBP53611 331 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 SP2Q02086 613 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 KIAA0753Q2KHM9 967 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 GNPTABQ3T906 1256 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 RAB11FIP4Q86YS3 637 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
CAPN5-207ENST00000533889 LRRC2Q9BYS8 371 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 GTF2IRD1Q9UHL9 959 aa20.25■□□□□ 0.83
CAPN5-207ENST00000533889 UNC80Q8N2C7 3258 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 SCN5AQ14524 2016 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 F2P00734 622 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 ATP2A2P16615 1042 aaKnown RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 UBA1P22314 1058 aaKnown RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 HSDL1Q3SXM5 330 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 USP17L6PQ6QN14 398 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 CAGE1Q8TC20 777 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 GAS2L1Q99501 681 aaPredicted RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 PRDM12Q9H4Q4 367 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 RTEL1Q9NZ71 1219 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 YBX2Q9Y2T7 364 aaKnown RBP20.24■□□□□ 0.83
CAPN5-207ENST00000533889 EYSQ5T1H1 3165 aa20.24■□□□□ 0.83
CAPN5-207ENST00000533889 STAM2O75886 525 aa20.23■□□□□ 0.83
CAPN5-207ENST00000533889 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
CAPN5-207ENST00000533889 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
CAPN5-207ENST00000533889 CCDC82Q8N4S0 544 aa20.23■□□□□ 0.83
CAPN5-207ENST00000533889 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
CAPN5-207ENST00000533889 HAS3O00219 553 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
CAPN5-207ENST00000533889 MYOGP15173 224 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 SELPP16109 830 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 CTAGE1Q96RT6 745 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 PCDHA11Q9Y5I1 949 aa20.22■□□□□ 0.83
CAPN5-207ENST00000533889 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
CAPN5-207ENST00000533889 hCG_1642624A0A1W2PR95 340 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 SPATA31C2B4DYI2 1134 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 HOXD8P13378 290 aaPredicted RBP20.21■□□□□ 0.83
CAPN5-207ENST00000533889 NEDD9Q14511 834 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 LRRC8DQ7L1W4 858 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 MICU3Q86XE3 530 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 INPP4AQ96PE3 977 aaPredicted RBP20.21■□□□□ 0.83
CAPN5-207ENST00000533889 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 FRMPD4Q14CM0 1322 aa20.21■□□□□ 0.83
CAPN5-207ENST00000533889 GBF1Q92538 1859 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 PIK3CDO00329 1044 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 MEIS2O14770 477 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 FIBPO43427 364 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 CDC45O75419 566 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 CKBP12277 381 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 ICAM3P32942 547 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 PTK7Q13308 1070 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 CYFIP1Q7L576 1253 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 SGMS1Q86VZ5 419 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 DHX38Q92620 1227 aaKnown RBP20.2■□□□□ 0.82
CAPN5-207ENST00000533889 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 BCAS3Q9H6U6 928 aa20.2■□□□□ 0.82
CAPN5-207ENST00000533889 MYO9BQ13459 2157 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 PRUNE2Q8WUY3 3088 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 H3BRB1 525 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 PARNO95453 639 aaKnown RBP20.19■□□□□ 0.82
CAPN5-207ENST00000533889 IGFBP4P22692 258 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 ZNF200P98182 395 aaPredicted RBP20.19■□□□□ 0.82
CAPN5-207ENST00000533889 PCNX4Q63HM2 1172 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 XRRA1Q6P2D8 792 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 NLRX1Q86UT6 975 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 PHOSPHO2Q8TCD6 241 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 C16orf70Q9BSU1 422 aa20.19■□□□□ 0.82
CAPN5-207ENST00000533889 TUT1Q9H6E5 874 aaKnown RBP20.19■□□□□ 0.82
CAPN5-207ENST00000533889 CHD9Q3L8U1 2897 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 TANC1Q9C0D5 1861 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 BAIAP3O94812 1187 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 LGALS2P05162 132 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 KCNJ6P48051 423 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 METTL7BQ6UX53 244 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 USP26Q9BXU7 913 aa20.18■□□□□ 0.82
CAPN5-207ENST00000533889 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 SP4Q02446 784 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 RBL2Q08999 1139 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
CAPN5-207ENST00000533889 RASEFQ8IZ41 740 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 TCEANC2Q96MN5 208 aa20.17■□□□□ 0.82
CAPN5-207ENST00000533889 COL25A1Q9BXS0 654 aaPredicted RBP20.17■□□□□ 0.82
CAPN5-207ENST00000533889 C17orf102A2RUQ5 167 aa20.16■□□□□ 0.82
CAPN5-207ENST00000533889 SPDYE3A6NKU9 549 aa20.16■□□□□ 0.82
CAPN5-207ENST00000533889 CA3P07451 260 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms