RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 NHEJ1Q9H9Q4 299 aaPredicted RBP13.28□□□□□ -0.28
ATM-222ENST00000533733 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
ATM-222ENST00000533733 FAM184BQ9ULE4 1060 aa13.28□□□□□ -0.28
ATM-222ENST00000533733 REXO2Q9Y3B8 237 aaKnown RBP13.28□□□□□ -0.28
ATM-222ENST00000533733 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
ATM-222ENST00000533733 IDEP14735 1019 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 ATP2B2Q01814 1243 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 ICA1Q05084 483 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 COASYQ13057 564 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 CDC37Q16543 378 aaPredicted RBP13.27□□□□□ -0.28
ATM-222ENST00000533733 UBE2SQ16763 222 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 BTNL9Q6UXG8 535 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 KCTD1Q719H9 257 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 DNAJC19Q96DA6 116 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 CCDC42Q96M95 316 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 FAM20AQ96MK3 541 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.28
ATM-222ENST00000533733 ZMYND15Q9H091 742 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 PANK4Q9NVE7 773 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 GUCA1BQ9UMX6 200 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.28
ATM-222ENST00000533733 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 FRMD3A2A2Y4 597 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 MMP10P09238 476 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 HERVK_113P62684 666 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 NFIAQ12857 509 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 EDRF1Q3B7T1 1238 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 LRRC55Q6ZSA7 311 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 DYMQ7RTS9 669 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 TRIM58Q8NG06 486 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 CRYGNQ8WXF5 182 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 RUBCNQ92622 972 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 DNAJC18Q9H819 358 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 HERC5Q9UII4 1024 aaKnown RBP13.27□□□□□ -0.29
ATM-222ENST00000533733 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.29
ATM-222ENST00000533733 ECE2O60344 883 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 PRLRP16471 622 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 CIITAP33076 1130 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 TERF2Q15554 542 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 WDR93Q6P2C0 686 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 C2CD5Q86YS7 1000 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
ATM-222ENST00000533733 NEK11Q8NG66 645 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 ACBD3Q9H3P7 528 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 FAM198AQ9UFP1 575 aa13.26□□□□□ -0.29
ATM-222ENST00000533733 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
ATM-222ENST00000533733 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 TACC1O75410 805 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 EIF3JO75822 258 aaKnown RBP13.25□□□□□ -0.29
ATM-222ENST00000533733 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 CYP3A4P08684 503 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 MUTP22033 750 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 SLC16A2P36021 539 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 SREBF1P36956 1147 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATM-222ENST00000533733 ITIH3Q06033 890 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 RBM26Q5T8P6 1007 aaKnown RBP13.25□□□□□ -0.29
ATM-222ENST00000533733 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 SECISBP2LQ93073 1101 aaKnown RBP13.25□□□□□ -0.29
ATM-222ENST00000533733 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATM-222ENST00000533733 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
ATM-222ENST00000533733 F5H6K3 240 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 MEIS2O14770 477 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 BMP3P12645 472 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 RPA1P27694 616 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 PLA2G4AP47712 749 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 ARHGAP4P98171 946 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 KLRC3Q07444 240 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 LONRF2Q1L5Z9 754 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 MAP9Q49MG5 647 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 CCDC70Q6NSX1 233 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 HDXQ7Z353 690 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 KIAA0825Q8IV33 1275 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 ANKZF1Q9H8Y5 726 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 EHMT1Q9H9B1 1298 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 DBNDD1Q9H9R9 158 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 CEP72Q9P209 647 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 JRKLQ9Y4A0 524 aa13.25□□□□□ -0.29
ATM-222ENST00000533733 DDTLA6NHG4 134 aaPredicted RBP13.24□□□□□ -0.29
ATM-222ENST00000533733 MAP2K7O14733 419 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 PJA2O43164 708 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 CCDC40Q4G0X9 1142 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
ATM-222ENST00000533733 KCNK18Q7Z418 384 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms