RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 RGS20O76081 388 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 SGPL1O95470 568 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 CAPN2P17655 700 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 ITGB5P18084 799 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 CNGA1P29973 690 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 ORC2Q13416 577 aaPredicted RBP24.77■■□□□ 1.56
VPS51-212ENST00000533656 MTMR1Q13613 665 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 EARS2Q5JPH6 523 aaKnown RBP24.77■■□□□ 1.56
VPS51-212ENST00000533656 SEPT14Q6ZU15 432 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 DEFB118Q96PH6 123 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 ZSCAN16Q9H4T2 348 aaPredicted RBP24.77■■□□□ 1.56
VPS51-212ENST00000533656 PAK6Q9NQU5 681 aaPredicted RBP24.77■■□□□ 1.56
VPS51-212ENST00000533656 RTEL1Q9NZ71 1219 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 MRVI1Q9Y6F6 885 aa24.77■■□□□ 1.56
VPS51-212ENST00000533656 CCND3P30281 292 aaPredicted RBP24.76■■□□□ 1.55
VPS51-212ENST00000533656 LETM2Q2VYF4 491 aa24.76■■□□□ 1.55
VPS51-212ENST00000533656 Q4G0T1 1027 aa24.76■■□□□ 1.55
VPS51-212ENST00000533656 MBOAT7Q96N66 472 aa24.76■■□□□ 1.55
VPS51-212ENST00000533656 WDR11Q9BZH6 1224 aa24.76■■□□□ 1.55
VPS51-212ENST00000533656 DDX20Q9UHI6 824 aaKnown RBP24.76■■□□□ 1.55
VPS51-212ENST00000533656 Q9Y3F1 56 aa24.76■■□□□ 1.55
VPS51-212ENST00000533656 SPATA31C2B4DYI2 1134 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 FAM86B1E9PN63 330 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 FARP2O94887 1054 aaPredicted RBP24.75■■□□□ 1.55
VPS51-212ENST00000533656 FAM86B2P0C5J1 330 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 ADCYAP1R1P41586 468 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 TNFAIP2Q03169 654 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 DUSP28Q4G0W2 176 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 RILPL1Q5EBL4 403 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 CCDC62Q6P9F0 684 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 GIMAP8Q8ND71 665 aaPredicted RBP24.75■■□□□ 1.55
VPS51-212ENST00000533656 SENP7Q9BQF6 1050 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 PDGFCQ9NRA1 345 aa24.75■■□□□ 1.55
VPS51-212ENST00000533656 COLQQ9Y215 455 aaPredicted RBP24.75■■□□□ 1.55
VPS51-212ENST00000533656 IGLV3-22A0A075B6J6 115 aa24.74■■□□□ 1.55
VPS51-212ENST00000533656 DUSP11O75319 330 aaKnown RBP24.74■■□□□ 1.55
VPS51-212ENST00000533656 TXNP10599 105 aaKnown RBP24.74■■□□□ 1.55
VPS51-212ENST00000533656 RARBP10826 455 aa24.74■■□□□ 1.55
VPS51-212ENST00000533656 PLA2G4DQ86XP0 818 aa24.74■■□□□ 1.55
VPS51-212ENST00000533656 DDX41Q9UJV9 622 aaKnown RBP24.74■■□□□ 1.55
VPS51-212ENST00000533656 FRMPD3Q5JV73 1810 aa24.74■■□□□ 1.55
VPS51-212ENST00000533656 SZT2Q5T011 3432 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 MCM3APO60318 1980 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 FAM205CA6NFA0 338 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 EDIL3O43854 480 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 CCNT1O60563 726 aaKnown RBP24.73■■□□□ 1.55
VPS51-212ENST00000533656 NEDD9Q14511 834 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 DPF3Q92784 378 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 KCNH7Q9NS40 1196 aa24.73■■□□□ 1.55
VPS51-212ENST00000533656 DDX25Q9UHL0 483 aaKnown RBP24.73■■□□□ 1.55
VPS51-212ENST00000533656 ZSCAN22P10073 491 aaPredicted RBP24.72■■□□□ 1.55
VPS51-212ENST00000533656 SMPD1P17405 629 aa24.72■■□□□ 1.55
VPS51-212ENST00000533656 RESTQ13127 1097 aa24.72■■□□□ 1.55
VPS51-212ENST00000533656 PRR16Q569H4 304 aa24.72■■□□□ 1.55
VPS51-212ENST00000533656 CYP2W1Q8TAV3 490 aa24.72■■□□□ 1.55
VPS51-212ENST00000533656 ZFP91Q96JP5 570 aaPredicted RBP24.72■■□□□ 1.55
VPS51-212ENST00000533656 SPC25Q9HBM1 224 aa24.72■■□□□ 1.55
VPS51-212ENST00000533656 GNEQ9Y223 722 aaKnown RBP24.72■■□□□ 1.55
VPS51-212ENST00000533656 TDP2O95551 362 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 GH1P01241 217 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 TFRCP02786 760 aaKnown RBP24.71■■□□□ 1.55
VPS51-212ENST00000533656 SEMA3FQ13275 785 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 TTC38Q5R3I4 469 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 DIS3LQ8TF46 1054 aaKnown RBP24.71■■□□□ 1.55
VPS51-212ENST00000533656 EMID1Q96A84 441 aaPredicted RBP24.71■■□□□ 1.55
VPS51-212ENST00000533656 LENG9Q96B70 501 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 CRISPLD2Q9H0B8 497 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 MYH7BA7E2Y1 1941 aa24.71■■□□□ 1.55
VPS51-212ENST00000533656 NFASCO94856 1347 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.7■■□□□ 1.54
VPS51-212ENST00000533656 TBX3O15119 743 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 ARIH2O95376 493 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 UBA1P22314 1058 aaKnown RBP24.7■■□□□ 1.54
VPS51-212ENST00000533656 NUCB2P80303 420 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 MYSM1Q5VVJ2 828 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 FERMT3Q86UX7 667 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 AP5M1Q9H0R1 490 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 AGO4Q9HCK5 861 aaKnown RBP24.7■■□□□ 1.54
VPS51-212ENST00000533656 TBC1D22BQ9NU19 505 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 DNAH12Q6ZR08 3092 aa24.7■■□□□ 1.54
VPS51-212ENST00000533656 KIAA1217Q5T5P2 1943 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 NEMFO60524 1076 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 BRD1O95696 1058 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 ARP10275 920 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 KCNA2P16389 499 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 NKX3-2P78367 333 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 LAMC2Q13753 1193 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 LY6KQ17RY6 165 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 CELF3Q5SZQ8 465 aaKnown RBP24.69■■□□□ 1.54
VPS51-212ENST00000533656 LHX8Q68G74 356 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 TLK2Q86UE8 772 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 SDF4Q9BRK5 362 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 ZNF577Q9BSK1 485 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 UPF3AQ9H1J1 476 aaKnown RBP24.69■■□□□ 1.54
VPS51-212ENST00000533656 XPNPEP3Q9NQH7 507 aa24.69■■□□□ 1.54
VPS51-212ENST00000533656 CIZ1Q9ULV3 898 aaPredicted RBP24.69■■□□□ 1.54
VPS51-212ENST00000533656 IPO5O00410 1097 aaKnown RBP24.68■■□□□ 1.54
VPS51-212ENST00000533656 ADCY6O43306 1168 aa24.68■■□□□ 1.54
VPS51-212ENST00000533656 F13A1P00488 732 aa24.68■■□□□ 1.54
VPS51-212ENST00000533656 DDIT3P35638 169 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms