RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SEPT14Q6ZU15 432 aa19.67■□□□□ 0.74
CTSB-229ENST00000533572 DAGLBQ8NCG7 672 aa19.67■□□□□ 0.74
CTSB-229ENST00000533572 PHF20Q9BVI0 1012 aa19.67■□□□□ 0.74
CTSB-229ENST00000533572 TRIOBPQ9H2D6 2365 aa19.67■□□□□ 0.74
CTSB-229ENST00000533572 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
CTSB-229ENST00000533572 FOSP01100 380 aaPredicted RBP19.66■□□□□ 0.74
CTSB-229ENST00000533572 MAGEA10P43363 369 aaPredicted RBP19.66■□□□□ 0.74
CTSB-229ENST00000533572 TLE2Q04725 743 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
CTSB-229ENST00000533572 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 PDCD2LQ9BRP1 358 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 EHMT1Q9H9B1 1298 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 PCDHA4Q9UN74 947 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 MROH7Q68CQ1 1323 aa19.66■□□□□ 0.74
CTSB-229ENST00000533572 DCDC2CA8MYV0 355 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 H3BQV1 296 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 CTAGE5O15320 804 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 PTGS1P23219 599 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 CCND2P30279 289 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 AP3B2Q13367 1082 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 TMEM63BQ5T3F8 832 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 KRT40Q6A162 431 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 TYW1BQ6NUM6 668 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 CXCL17Q6UXB2 119 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 POLR3EQ9NVU0 708 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 MRVI1Q9Y6F6 885 aa19.65■□□□□ 0.74
CTSB-229ENST00000533572 MMP1P03956 469 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 CLTBP09497 229 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 PGM5Q15124 567 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 BLIDQ8IZY5 108 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 REXO1Q8N1G1 1221 aaKnown RBP19.64■□□□□ 0.73
CTSB-229ENST00000533572 GDF15Q99988 308 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 PDLIM7Q9NR12 457 aa19.64■□□□□ 0.73
CTSB-229ENST00000533572 SPDYE3A6NKU9 549 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 ARVCFO00192 962 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 MEIS2O14770 477 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 TLR3O15455 904 aaKnown RBP19.63■□□□□ 0.73
CTSB-229ENST00000533572 GH1P01241 217 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 MYL3P08590 195 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 KRT2P35908 639 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 MDM2Q00987 491 aaPredicted RBP19.63■□□□□ 0.73
CTSB-229ENST00000533572 COPS5Q92905 334 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 TOX2Q96NM4 488 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 UBE2OQ9C0C9 1292 aaKnown RBP19.63■□□□□ 0.73
CTSB-229ENST00000533572 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
CTSB-229ENST00000533572 DNAH12Q6ZR08 3092 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 A0A1W2PPC1 479 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 ARIH2O95376 493 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 CLK2P49760 499 aaKnown RBP19.62■□□□□ 0.73
CTSB-229ENST00000533572 GNPTABQ3T906 1256 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 KCNV1Q6PIU1 500 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 USP17L6PQ6QN14 398 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 ANKRD33Q7Z3H0 272 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 VSIG10LQ86VR7 867 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 SEZ6LQ9BYH1 1024 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 TMEM39AQ9NV64 488 aa19.62■□□□□ 0.73
CTSB-229ENST00000533572 KPNA6O60684 536 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 BMP8BP34820 402 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 ITGA7Q13683 1181 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
CTSB-229ENST00000533572 LY6KQ17RY6 165 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 CCDC62Q6P9F0 684 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 KRT25Q7Z3Z0 450 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 IL31RAQ8NI17 732 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 FOXP1Q9H334 677 aaPredicted RBP19.61■□□□□ 0.73
CTSB-229ENST00000533572 PRO3102Q9H379 93 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 KCNJ14Q9UNX9 436 aa19.61■□□□□ 0.73
CTSB-229ENST00000533572 STAM2O75886 525 aa19.6■□□□□ 0.73
CTSB-229ENST00000533572 RAG1P15918 1043 aa19.6■□□□□ 0.73
CTSB-229ENST00000533572 SYT1P21579 422 aa19.6■□□□□ 0.73
CTSB-229ENST00000533572 FXR1P51114 621 aaKnown RBP eCLIP19.6■□□□□ 0.73
CTSB-229ENST00000533572 DIS3L2Q8IYB7 885 aaKnown RBP19.6■□□□□ 0.73
CTSB-229ENST00000533572 MTG1Q9BT17 334 aaPredicted RBP19.6■□□□□ 0.73
CTSB-229ENST00000533572 KIAA1217Q5T5P2 1943 aa19.6■□□□□ 0.73
CTSB-229ENST00000533572 FRMPD4Q14CM0 1322 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 A6NJR5 290 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 STX6O43752 255 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 DTNBO60941 627 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 PURAQ00577 322 aaKnown RBP19.59■□□□□ 0.73
CTSB-229ENST00000533572 XRRA1Q6P2D8 792 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 SH3RF1Q7Z6J0 888 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 DHX37Q8IY37 1157 aaKnown RBP19.59■□□□□ 0.73
CTSB-229ENST00000533572 SPRYD3Q8NCJ5 442 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
CTSB-229ENST00000533572 DDX41Q9UJV9 622 aaKnown RBP19.59■□□□□ 0.73
CTSB-229ENST00000533572 PCDHA6Q9UN73 950 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 PCDHA8Q9Y5H6 950 aa19.59■□□□□ 0.73
CTSB-229ENST00000533572 CCDC194A0A1B0GVG4 234 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 TRIM43BA6NCK2 446 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 M0R2N6 131 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 KIAA0355O15063 1070 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 CDK7P50613 346 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 PSMC6P62333 389 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 ARHGAP1Q07960 439 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 FAAP100Q0VG06 881 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 LAMC2Q13753 1193 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 NPY5RQ15761 445 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 UBE2SQ16763 222 aa19.58■□□□□ 0.72
CTSB-229ENST00000533572 AFG1LQ8WV93 481 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms