RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CFPP27918 469 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 PMLP29590 882 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 NCKAP1LP55160 1127 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 FOXO4P98177 505 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 GUCY1A3Q02108 690 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 CACNB2Q08289 660 aaPredicted RBP4.08□□□□□ -1.76
ATM-220ENST00000533526 CNKSR3Q6P9H4 555 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 ETV3LQ6ZN32 361 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 OTOP3Q7RTS5 596 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 MTDHQ86UE4 582 aaKnown RBP4.08□□□□□ -1.76
ATM-220ENST00000533526 ZC3H18Q86VM9 953 aaKnown RBP4.08□□□□□ -1.76
ATM-220ENST00000533526 MIB1Q86YT6 1006 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 CILP2Q8IUL8 1156 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 LRRC56Q8IYG6 542 aaPredicted RBP4.08□□□□□ -1.76
ATM-220ENST00000533526 TMEFF1Q8IYR6 380 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 SYNPOQ8N3V7 929 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 DDX11Q96FC9 970 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 JAM3Q9BX67 310 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 USP35Q9P2H5 1018 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 FBXL7Q9UJT9 491 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 SIT1Q9Y3P8 196 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 TRAF6Q9Y4K3 522 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 PTCH2Q9Y6C5 1203 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 ASXL2Q76L83 1435 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 PLD2O14939 933 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 KCNQ2O43526 872 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 ATF2P15336 505 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 NKX3-2P78367 333 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 FZD5Q13467 585 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 SSPNQ14714 243 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 TRIM61Q5EBN2 209 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 TCERG1LQ5VWI1 586 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 C16orf59Q7L2K0 433 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 B3GNT8Q7Z7M8 397 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 NOP9Q86U38 636 aaKnown RBP4.07□□□□□ -1.76
ATM-220ENST00000533526 FAM129CQ86XR2 697 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 FAM126BQ8IXS8 530 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 SH3TC2Q8TF17 1288 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 FBXW5Q969U6 566 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 MAGEB10Q96LZ2 347 aaPredicted RBP4.07□□□□□ -1.76
ATM-220ENST00000533526 PWWP2AQ96N64 755 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 YIPF4Q9BSR8 244 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 PDGFDQ9GZP0 370 aaPredicted RBP4.07□□□□□ -1.76
ATM-220ENST00000533526 MYOTQ9UBF9 498 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 PCDHB4Q9Y5E5 795 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 PCDHA8Q9Y5H6 950 aa4.07□□□□□ -1.76
ATM-220ENST00000533526 TCRBV5S2A0A599 114 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 ARVCFO00192 962 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 NPTXRO95502 500 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 CYP2C8P10632 490 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 PI3P19957 117 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 AFF3P51826 1226 aaKnown RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 ST5P78524 1137 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 FNDC3BQ53EP0 1204 aaKnown RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 FAM47CQ5HY64 1035 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 CD300LDQ6UXZ3 194 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 EP400NLQ6ZTU2 488 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 NLGN4XQ8N0W4 816 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 GSTCDQ8NEC7 633 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 UHMK1Q8TAS1 419 aaKnown RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 PIP4K2CQ8TBX8 421 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 DACT3Q96B18 629 aaPredicted RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 TOE1Q96GM8 510 aaKnown RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 KCNJ15Q99712 375 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 IRF2BPLQ9H1B7 796 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 PIF1Q9H611 641 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 BCAS3Q9H6U6 928 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 IPPKQ9H8X2 491 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 NCOA5Q9HCD5 579 aaKnown RBP4.06□□□□□ -1.76
ATM-220ENST00000533526 TMEM260Q9NX78 707 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 HSPBP1Q9NZL4 362 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 ASH2LQ9UBL3 628 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 NDOR1Q9UHB4 597 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 SFMBT1Q9UHJ3 866 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 PMF1-BGLAPU3KQ54 211 aa4.06□□□□□ -1.76
ATM-220ENST00000533526 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.05□□□□□ -1.76
ATM-220ENST00000533526 B4E1Z4 1266 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 CRTAMO95727 393 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 JAG1P78504 1218 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 TCEA2Q15560 299 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 CRY1Q16526 586 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 HABP4Q5JVS0 413 aaKnown RBP4.05□□□□□ -1.76
ATM-220ENST00000533526 HOMER1Q86YM7 354 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 C1QL4Q86Z23 238 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 ZC3H7AQ8IWR0 971 aaKnown RBP4.05□□□□□ -1.76
ATM-220ENST00000533526 TTLL6Q8N841 843 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 ARRDC4Q8NCT1 418 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 TTLL11Q8NHH1 800 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 PCDH19Q8TAB3 1148 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 SMARCC2Q8TAQ2 1214 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 SLC7A14Q8TBB6 771 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 APPBP2Q92624 585 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 SLC52A2Q9HAB3 445 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 EPB41L4AQ9HCS5 686 aaPredicted RBP4.05□□□□□ -1.76
ATM-220ENST00000533526 CATSPERZQ9NTU4 200 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 DTLQ9NZJ0 730 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 PPARGC1AQ9UBK2 798 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms