RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	OR14I1	A6ND48	311 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	NOTO	A8MTQ0	251 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	C22orf46	C9J442	243 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	FAM47E-STBD1	D6RA91	191 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	MAFK	O60675	156 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	C6orf222	P0C671	652 aa	Predicted RBP	4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	FLT3	P36888	993 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	CEBPA	P49715	358 aa	Predicted RBP	4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	TIGD5	Q53EQ6	642 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	MBLAC2	Q68D91	279 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	NLGN1	Q8N2Q7	840 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	INTS4	Q96HW7	963 aa	Known RBP	4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	MENT	Q9BUN1	341 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	DBR1	Q9UK59	544 aa	Known RBP	4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	TRAF6	Q9Y4K3	522 aa		4.84	□□□□□ -1.63
LMO7-223	ENST00000533299	OTOL1	A6NHN0	477 aa	Predicted RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	PPP1R12A	O14974	1030 aa	Predicted RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	DGKI	O75912	1065 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	RAPGEF3	O95398	923 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	LCP1	P13796	627 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	PAK1	Q13153	545 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	FAM47C	Q5HY64	1035 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	ADGRF1	Q5T601	910 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	DCP2	Q8IU60	420 aa	Known RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	RIOX2	Q8IUF8	465 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	NETO2	Q8NC67	525 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	GSTCD	Q8NEC7	633 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	SORCS2	Q96PQ0	1159 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	AP5M1	Q9H0R1	490 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	EPB41L1	Q9H4G0	881 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	SLC52A2	Q9HAB3	445 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	CADPS	Q9ULU8	1353 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	SRGAP3	O43295	1099 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	CYBB	P04839	570 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	GRK2	P25098	689 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	TACR1	P25103	407 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	GRK3	P35626	688 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	ERVFRD-1	P60508	538 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	ST5	P78524	1137 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	SPIRE1	Q08AE8	756 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	WWC2	Q6AWC2	1192 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	PAQR3	Q6TCH7	311 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	TEX2	Q8IWB9	1127 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299		Q8N1Y9	231 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	DPF3	Q92784	378 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	NINJ1	Q92982	152 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	SHISA4	Q96DD7	197 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	PEX11G	Q96HA9	241 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	TEPSIN	Q96N21	525 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	MTA3	Q9BTC8	594 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	INTS7	Q9NVH2	962 aa	Known RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.83	□□□□□ -1.64
LMO7-223	ENST00000533299		X6R8D5	127 aa		4.83	□□□□□ -1.64
LMO7-223	ENST00000533299	RFXAP	O00287	272 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	ARNTL	O00327	626 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	KRIT1	O00522	736 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	ZBTB7A	O95365	584 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	NPTXR	O95502	500 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	CRTAM	O95727	393 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	SOD2	P04179	222 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	RAB3GAP1	Q15042	981 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	BRAP	Q7Z569	592 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	SLC7A14	Q8TBB6	771 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	PLEKHO2	Q8TD55	490 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	TNFRSF12A	Q9NP84	129 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	PCDHA9	Q9Y5H5	950 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	PCDHA8	Q9Y5H6	950 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	CD2AP	Q9Y5K6	639 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	ASXL2	Q76L83	1435 aa		4.82	□□□□□ -1.64
LMO7-223	ENST00000533299	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	OPA1	O60313	960 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	ASL	P04424	464 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	MSL3P1	P0C860	447 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	FPR2	P25090	351 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	IGFALS	P35858	605 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	SLC9A5	Q14940	896 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	EP400NL	Q6ZTU2	488 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	UBE2R2	Q712K3	238 aa	Predicted RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	DDX53	Q86TM3	631 aa	Known RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	NIM1K	Q8IY84	436 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	SEC14L1	Q92503	715 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	FBXW5	Q969U6	566 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	CNOT11	Q9UKZ1	510 aa	Known RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	CNOT6	Q9ULM6	557 aa	Known RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	PRKAB1	Q9Y478	270 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	NUDT19	A8MXV4	375 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299		F8W031	263 aa	Predicted RBP	4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	ARVCF	O00192	962 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	HRK	O00198	91 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	MSC	O60682	206 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	SEMA7A	O75326	666 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	NTRK1	P04629	796 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	DBH	P09172	617 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	GLI4	P10075	376 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	GNAT1	P11488	350 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	SLC6A11	P48066	632 aa		4.81	□□□□□ -1.64
LMO7-223	ENST00000533299	GALK1	P51570	392 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms