RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MOXD1Q6UVY6 613 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 KRBA2Q6ZNG9 492 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 FAM133AQ8N9E0 248 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 SYMPKQ92797 1274 aaKnown RBP20.86■□□□□ 0.93
SMPD1-208ENST00000533123 USP25Q9UHP3 1055 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 CALCRLQ16602 461 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 GJA10Q969M2 543 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 LENG9Q96B70 501 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 MBOAT7Q96N66 472 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 DNAJC25-GNG10A0A024R161 153 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 A0A087X0B3 334 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 FOXN1O15353 648 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 NR3C2P08235 984 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 OR52Z1P0C646 297 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 MAPK4P31152 587 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 PNOCQ13519 176 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 CEP55Q53EZ4 464 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 CNNM3Q8NE01 707 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 DNERQ8NFT8 737 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 IGLV3-22A0A075B6J6 115 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 BIN1O00499 593 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 STRNO43815 780 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 TBC1D8O95759 1140 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 ADORA2AP29274 412 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 Q4G0T1 1027 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 MTMR9Q96QG7 549 aa20.85■□□□□ 0.93
SMPD1-208ENST00000533123 DOCK3Q8IZD9 2030 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 LAD1O00515 517 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 ITGB5P18084 799 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 TXKP42681 527 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 ZNF165P49910 485 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 ALDH5A1P51649 535 aaPredicted RBP20.84■□□□□ 0.93
SMPD1-208ENST00000533123 ARL6IP4Q66PJ3 421 aaKnown RBP20.84■□□□□ 0.93
SMPD1-208ENST00000533123 PLEKHH3Q7Z736 793 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 VSIG10LQ86VR7 867 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 HAS1Q92839 578 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 SERTAD1Q9UHV2 236 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 TRPA1O75762 1119 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 DTHD1Q6ZMT9 781 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 MXRA8Q9BRK3 442 aa20.84■□□□□ 0.93
SMPD1-208ENST00000533123 ADD3Q9UEY8 706 aaKnown RBP20.84■□□□□ 0.93
SMPD1-208ENST00000533123 PLXNB2O15031 1838 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 MARCH6O60337 910 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 PLA2G4DQ86XP0 818 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 ABRAQ8N0Z2 381 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 PDLIM2Q96JY6 352 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 FGD4Q96M96 766 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 WDR11Q9BZH6 1224 aa20.83■□□□□ 0.93
SMPD1-208ENST00000533123 MEIS1O00470 390 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 COBLO75128 1261 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 CCND2P30279 289 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 GRAMD1CQ8IYS0 662 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 DHX58Q96C10 678 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 KCNMB3Q9NPA1 279 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 RNF186Q9NXI6 227 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 MSH4O15457 936 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 AP5Z1O43299 807 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 ACTN4O43707 911 aaKnown RBP20.82■□□□□ 0.92
SMPD1-208ENST00000533123 PRPHP41219 470 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 TECP42680 631 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 C1QTNF8P60827 252 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 GRB14Q14449 540 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 DPCR1Q3MIW9 517 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 IWS1Q96ST2 819 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 ANO10Q9NW15 660 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 UBIAD1Q9Y5Z9 338 aa20.82■□□□□ 0.92
SMPD1-208ENST00000533123 ARP10275 920 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 HSPA6P17066 643 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 ISM2Q6H9L7 571 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 ETNPPLQ8TBG4 499 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 NAP1L5Q96NT1 182 aaPredicted RBP20.81■□□□□ 0.92
SMPD1-208ENST00000533123 PRR29P0C7W0 189 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 PLCB2Q00722 1185 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 MDM2Q00987 491 aaPredicted RBP20.81■□□□□ 0.92
SMPD1-208ENST00000533123 XRRA1Q6P2D8 792 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 TTC12Q9H892 705 aaPredicted RBP20.81■□□□□ 0.92
SMPD1-208ENST00000533123 JADE2Q9NQC1 790 aa20.81■□□□□ 0.92
SMPD1-208ENST00000533123 CTGFP29279 349 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 CDC25AP30304 524 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 STXBP2Q15833 593 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 ZNF792Q3KQV3 632 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 DPP9Q86TI2 863 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 KCNH7Q9NS40 1196 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 TUBE1Q9UJT0 475 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 SETQ01105 290 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-208ENST00000533123 MTMR1Q13613 665 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 IQCB1Q15051 598 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 PCDHA12Q9UN75 941 aa20.8■□□□□ 0.92
SMPD1-208ENST00000533123 CENPFP49454 3210 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 ESPNB1AK53 854 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 RGS20O76081 388 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 EDNRBP24530 442 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 ZRSR1Q15695 479 aaKnown RBP20.79■□□□□ 0.92
SMPD1-208ENST00000533123 PKD2L1Q9P0L9 805 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 PCDHA5Q9Y5H7 936 aa20.79■□□□□ 0.92
SMPD1-208ENST00000533123 SLC15A5A6NIM6 579 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 TBX3O15119 743 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms