RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TMEM60Q9H2L4 133 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 TAF1DQ9H5J8 278 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 METTL14Q9HCE5 456 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 PLAAQ9Y263 795 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 ATP6V0A2Q9Y487 856 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 BAZ2BQ9UIF8 2168 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 A0A1B0GUA9 196 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 NCK2O43639 380 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 CPP00450 1065 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 GFPT1Q06210 699 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 NLRP14Q86W24 1093 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 TGFBRAP1Q8WUH2 860 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 CTNNBL1Q8WYA6 563 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 NSUN4Q96CB9 384 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SAP30BPQ9UHR5 308 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 DMGDHQ9UI17 866 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
BDNF-216ENST00000532997 CAPN6Q9Y6Q1 641 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 CYP2D6P10635 497 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 EIF3BP55884 814 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 FAM83BQ5T0W9 1011 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 PPP4R3AQ6IN85 833 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 CUL5Q93034 780 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 SCLT1Q96NL6 688 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 PLVAPQ9BX97 442 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 RBM12Q9NTZ6 932 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 RNF225M0QZC1 329 aaPredicted RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 SHOX2O60902 331 aaPredicted RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 ABL1P00519 1130 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 ERCC3P19447 782 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 MDH1P40925 334 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 SLC1A4P43007 532 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 KLK7P49862 253 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 ADAM9Q13443 819 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 SNCBQ16143 134 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 DCAF17Q5H9S7 520 aaPredicted RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 CREG2Q8IUH2 290 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 DUSP9Q99956 384 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 PCDHA12Q9UN75 941 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 XRCC5P13010 732 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 GBP1P32455 592 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 LSP1P33241 339 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 PMS1P54277 932 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 SIK1P57059 783 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 MRPS25P82663 173 aaKnown RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 NEDD9Q14511 834 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 CENPPQ6IPU0 288 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 GPBP1Q86WP2 473 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 MAPKAPK5Q8IW41 473 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 RAD54LQ92698 747 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 FAM84BQ96KN1 310 aaPredicted RBP10.31□□□□□ -0.76
BDNF-216ENST00000532997 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 MINPP1Q9UNW1 487 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 DUSP10Q9Y6W6 482 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
BDNF-216ENST00000532997 PJA2O43164 708 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 KRT13P13646 458 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 DAAM2Q86T65 1068 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 IRF2BP1Q8IU81 584 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 C3orf20Q8ND61 904 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 JAG2Q9Y219 1238 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 STXBP3O00186 592 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 MPHOSPH10O00566 681 aaKnown RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 KIF4AO95239 1232 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 HNRNPH3P31942 346 aaKnown RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 RPAINQ86UA6 219 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 ZNF473Q8WTR7 871 aaKnown RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 DDX12PQ92771 950 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 RSRC1Q96IZ7 334 aaKnown RBP10.3□□□□□ -0.76
BDNF-216ENST00000532997 TMEM47Q9BQJ4 181 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 ARHGAP20Q9P2F6 1191 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 DISP2A7MBM2 1401 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 NWD2Q9ULI1 1742 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 CCDC169A6NNP5 214 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 ANXA13P27216 316 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 PDIA5Q14554 519 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 LRRC41Q15345 812 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 SLC18A3Q16572 532 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 EXOC3L4Q17RC7 722 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 C12orf60Q5U649 245 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 HS2ST1Q7LGA3 356 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 FAM133AQ8N9E0 248 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
BDNF-216ENST00000532997 GEMIN8Q9NWZ8 242 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms