RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RMDN3Q96TC7 470 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 RAB17Q9H0T7 212 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 STK25O00506 426 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SH2B2O14492 632 aaPredicted RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 HEXIM1O94992 359 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 KBTBD13C9JR72 458 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 DPYSL4O14531 572 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PPP6R2O75170 966 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 TFAMQ00059 246 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 KRT76Q01546 638 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SNAPC2Q13487 334 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 EXOC3L4Q17RC7 722 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 RNF146Q9NTX7 359 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ANAPC5Q9UJX4 755 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 LMNB1P20700 586 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ECE1P42892 770 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 GOLGA8FQ08AF8 430 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 GOLGA8DPQ0D2H9 430 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SPP2Q13103 211 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 SIX6OS1Q8N1H7 587 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ZBTB5O15062 677 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 KCNQ2O43526 872 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 IFNAR1P17181 557 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PHBP35232 272 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PSMD2Q13200 908 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 CPLX4Q7Z7G2 160 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 NDUFAF2Q8N183 169 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 RYBPQ8N488 228 aaPredicted RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 OR8K1Q8NGG5 319 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PUS7LQ9H0K6 701 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 THAP12O43422 761 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 ERCC3P19447 782 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 PCK1P35558 622 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
COLCA1-203ENST00000532918 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
COLCA1-203ENST00000532918 C19orf81C9J6K1 198 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 K7ERI5 159 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 RHOXF2BP0C7M4 288 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 MTMR1Q13613 665 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 MTMR3Q13615 1198 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 CACNA2D3Q8IZS8 1091 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 NEK9Q8TD19 979 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 RHOXF2Q9BQY4 288 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 OGFRQ9NZT2 677 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 SFNP31947 248 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 AP1ARQ63HQ0 302 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 FAM186BQ8IYM0 893 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.67□□□□□ -0.54
COLCA1-203ENST00000532918 GSDMAQ96QA5 445 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 LONRF2Q1L5Z9 754 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 TKFCQ3LXA3 575 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 BSPRYQ5W0U4 402 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 BBOF1Q8ND07 529 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 RAVER2Q9HCJ3 691 aaKnown RBP11.67□□□□□ -0.54
COLCA1-203ENST00000532918 ZKSCAN5Q9Y2L8 839 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 CACNB3P54284 484 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 ZMAT2Q96NC0 199 aaKnown RBP11.67□□□□□ -0.54
COLCA1-203ENST00000532918 ISCA1Q9BUE6 129 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
COLCA1-203ENST00000532918 I3L4J1 428 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 PALM2Q8IXS6 379 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 STAG1Q8WVM7 1258 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 OSBP2Q969R2 916 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 NLRP4Q96MN2 994 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SEPT10Q9P0V9 454 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms