RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 TINF2Q9BSI4 451 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 FTOQ9C0B1 505 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 C6orf50Q9HD87 102 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 PNMA2Q9UL42 364 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 DIS3Q9Y2L1 958 aaKnown RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 VPS37CA5D8V6 355 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 FAM86B1E9PN63 330 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 SORBS3O60504 671 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 SLC34A2O95436 690 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 HMGCRP04035 888 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 FAM86B2P0C5J1 330 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 MYCLP12524 364 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 KRT2P35908 639 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ADCYAP1R1P41586 468 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 TOB1P50616 345 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 MRPL12P52815 198 aaKnown RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ARHGAP4P98171 946 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ARHGEF16Q5VV41 709 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 TBCKQ8TEA7 893 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ABHD8Q96I13 439 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 UNC93B1Q9H1C4 597 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 RTEL1Q9NZ71 1219 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 ZHX1Q9UKY1 873 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-202ENST00000532501 KIF3AQ9Y496 699 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 MRVI1Q9Y6F6 885 aa9.14□□□□□ -0.95
TRIM49-202ENST00000532501 KIAA0100Q14667 2235 aaKnown RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 IGLV3-22A0A075B6J6 115 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 MYADML2A6NDP7 307 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 SLC37A4O43826 429 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 GNRH1P01148 92 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 ARP10275 920 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 HOXD10P28358 340 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 GNA11P29992 359 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 SP2Q02086 613 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 AP3B2Q13367 1082 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 LARP1BQ659C4 914 aaKnown RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 CCDC62Q6P9F0 684 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 PXYLP1Q8TE99 480 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 NSUN6Q8TEA1 469 aaKnown RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 CCDC12Q8WUD4 166 aaPredicted RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 WASF1Q92558 559 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 ARMC5Q96C12 935 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 INPP4AQ96PE3 977 aaPredicted RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 SYNGAP1Q96PV0 1343 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 ZNFX1Q9P2E3 1918 aaKnown RBP9.13□□□□□ -0.95
TRIM49-202ENST00000532501 UBIAD1Q9Y5Z9 338 aa9.13□□□□□ -0.95
TRIM49-202ENST00000532501 PLXNA1Q9UIW2 1896 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 MKI67P46013 3256 aaKnown RBP9.12□□□□□ -0.95
TRIM49-202ENST00000532501 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 CTAGE5O15320 804 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 ATP9AO75110 1047 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 SMPD1P17405 629 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 U2AF2P26368 475 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM49-202ENST00000532501 PRMT2P55345 433 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 TRAF1Q13077 416 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 ACVR2BQ13705 512 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 SLC9C1Q4G0N8 1177 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 PCNX4Q63HM2 1172 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 SEPT14Q6ZU15 432 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 PKD2L1Q9P0L9 805 aa9.12□□□□□ -0.95
TRIM49-202ENST00000532501 ADD3Q9UEY8 706 aaKnown RBP9.12□□□□□ -0.95
TRIM49-202ENST00000532501 RBM47A0AV96 593 aaKnown RBP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 ASB14A6NK59 587 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 STX6O43752 255 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 CYP3A4P08684 503 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 CCL5P13501 91 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 UBA1P22314 1058 aaKnown RBP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 CIITAP33076 1130 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 PDE4DQ08499 809 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 ITGB3BPQ13352 177 aaPredicted RBP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 NONOQ15233 471 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 LY6KQ17RY6 165 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 CCDC144BQ3MJ40 725 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 MFSD14CQ5VZR4 134 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 MCTP1Q6DN14 999 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 GALNT17Q6IS24 598 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 KRT25Q7Z3Z0 450 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 NOSTRINQ8IVI9 506 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 MBOAT7Q96N66 472 aa9.11□□□□□ -0.95
TRIM49-202ENST00000532501 MAP3K20Q9NYL2 800 aaKnown RBP9.11□□□□□ -0.95
TRIM49-202ENST00000532501 CCDC194A0A1B0GVG4 234 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 H3BQV1 296 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 MEIS1O00470 390 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 LCE2BO14633 110 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 BRD1O95696 1058 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 FOSP01100 380 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 KCNA2P16389 499 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms