RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 KLHL33A6NCF5 533 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 H7C0S8 307 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 MAFO75444 373 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 B3GALNT1O75752 331 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 APOA4P06727 396 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 VEGFAP15692 232 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 PEX2P28328 305 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 DRG2P55039 364 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 ASIC2Q16515 512 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 GNPTABQ3T906 1256 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 IZUMO3Q5VZ72 239 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 KDELC2Q7Z4H8 507 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 RTKN2Q8IZC4 609 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 ANKRD52Q8NB46 1076 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 ZNF784Q8NCA9 323 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 CLRN3Q8NCR9 226 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 TRAPPC12Q8WVT3 735 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 RSAD2Q8WXG1 361 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 HPS3Q969F9 1004 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 JAKMIP1Q96N16 626 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 ZNF830Q96NB3 372 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 KIAA1683Q9H0B3 1180 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 DEF6Q9H4E7 631 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 ZWILCHQ9H900 591 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 PIH1D1Q9NWS0 290 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
ECHDC1-222ENST00000531967 C11orf95C9JLR9 678 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 BHMG1C9JSJ3 638 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 NCK2O43639 380 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 SOD2P04179 222 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 CCDC159P0C7I6 412 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 INPP5BP32019 993 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TUBP50607 506 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 ARL4CP56559 192 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 CDC16Q13042 620 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TMED1Q13445 227 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TAF5Q15542 800 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 HIF1AQ16665 826 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 ABRAXAS1Q6UWZ7 409 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 GRIN3AQ8TCU5 1115 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 CNKSR1Q969H4 720 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 SPSB2Q99619 263 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 NIFKQ9BYG3 293 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 DACT1Q9NYF0 836 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 A0A087X0M5 115 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 A0A1B0GX30 115 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 B4E1Z4 1266 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 IPO8O15397 1037 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TUSC2O75896 110 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 MYCLP12524 364 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 TXLNAP40222 546 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 MOGSQ13724 837 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 SCARB2Q14108 478 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 LRRC32Q14392 662 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 IER5Q5VY09 327 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 LILRA6Q6PI73 481 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 GALNTL5Q7Z4T8 443 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 GRAMD1CQ8IYS0 662 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 NCAPGQ9BPX3 1015 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 ZNF277Q9NRM2 450 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 LRP2BPQ9P2M1 347 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 KANSL3Q9P2N6 904 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 GRHPRQ9UBQ7 328 aa5.96□□□□□ -1.46
ECHDC1-222ENST00000531967 C17orf113A0A1B0GUU1 675 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 FAM86C2PA6NEL3 165 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 F5H0A9 414 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 CKMT1AP12532 417 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 KRT10P13645 584 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 CD86P42081 329 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 LSSP48449 732 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 MAP2K1Q02750 393 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 METTL24Q5JXM2 366 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 INTS3Q68E01 1043 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 SLC30A6Q6NXT4 461 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 TATDN1Q6P1N9 297 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 VASH1Q7L8A9 365 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 CCNJLQ8IV13 435 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 STON2Q8WXE9 905 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 NUP62CLQ9H1M0 184 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 SLC13A4Q9UKG4 626 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 INO80B-WBP1J3KQ70 363 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 KPNA5O15131 536 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 STMN1P16949 149 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 KCNA6P17658 529 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 MAPK10P53779 464 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 RPL6Q02878 288 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 MLLT1Q03111 559 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 PRKG1Q13976 671 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 MBTPS1Q14703 1052 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 POSTNQ15063 836 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 PKDCCQ504Y2 493 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 FAM209BQ5JX69 171 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 PGBD2Q6P3X8 592 aa5.95□□□□□ -1.46
ECHDC1-222ENST00000531967 FAM47EQ6ZV65 393 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 592.4 ms