RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 VTI1AQ96AJ9 217 aa12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
GPATCH4-216ENST00000531900 GRIN2DO15399 1336 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 MROH7Q68CQ1 1323 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 PQBP1O60828 265 aaKnown RBP12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 DEXIO95424 95 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 RAG1P15918 1043 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 PTGS1P23219 599 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 GNA11P29992 359 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 ADCY7P51828 1080 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 NEK4P51957 841 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 SP2Q02086 613 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 SCRN1Q12765 414 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 TRIM22Q8IYM9 498 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 COPS5Q92905 334 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 CDHR1Q96JP9 859 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 UBIAD1Q9Y5Z9 338 aa12.39□□□□□ -0.43
GPATCH4-216ENST00000531900 STK36Q9NRP7 1315 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 CPLX1O14810 134 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 FIBPO43427 364 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 PPFIA4O75335 1185 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 CDKL5O76039 1030 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 SREBF1P36956 1147 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 SEMA3FQ13275 785 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 NEDD9Q14511 834 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 UBE2SQ16763 222 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 ME3Q16798 604 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 CCDC148Q8NFR7 591 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 MTG1Q9BT17 334 aaPredicted RBP12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 SLKQ9H2G2 1235 aaPredicted RBP12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 C6orf50Q9HD87 102 aa12.38□□□□□ -0.43
GPATCH4-216ENST00000531900 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 CD4P01730 458 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 MMP3P08254 477 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 CYP3A4P08684 503 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 ITGB5P18084 799 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 PTPN11Q06124 597 aaPredicted RBP12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 SHHQ15465 462 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 NFRKBQ6P4R8 1299 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 METTL7BQ6UX53 244 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 FAM126BQ8IXS8 530 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 GIMAP8Q8ND71 665 aaPredicted RBP12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 AFG1LQ8WV93 481 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 ANO3Q9BYT9 981 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
GPATCH4-216ENST00000531900 DOCK5Q9H7D0 1870 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 M0R2N6 131 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 MEIS1O00470 390 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 TLR3O15455 904 aaKnown RBP12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 GGPS1O95749 300 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 STK3Q13188 491 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 DGKDQ16760 1214 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 Q7L0L9 218 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 NIPA1Q7RTP0 329 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 SESTD1Q86VW0 696 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 KAT2BQ92831 832 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 MXRA8Q9BRK3 442 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 MTMR10Q9NXD2 777 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 TBX21Q9UL17 535 aa12.36□□□□□ -0.43
GPATCH4-216ENST00000531900 HAS3O00219 553 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 F2P00734 622 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 KCNA2P16389 499 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 CIITAP33076 1130 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 FPGSQ05932 587 aa12.35□□□□□ -0.43
GPATCH4-216ENST00000531900 NPY5RQ15761 445 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms