RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 HOXD8P13378 290 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-212ENST00000531589 ATP2A2P16615 1042 aaKnown RBP15.14■□□□□ 0.01
SF3B2-212ENST00000531589 UBA1P22314 1058 aaKnown RBP15.14■□□□□ 0.01
SF3B2-212ENST00000531589 ICAM3P32942 547 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 KIAA0753Q2KHM9 967 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 GDF6Q6KF10 455 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-212ENST00000531589 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 PHOSPHO2Q8TCD6 241 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 SLC9A7Q96T83 725 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 ALG1Q9BT22 464 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 PCDHA11Q9Y5I1 949 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 LAMA2P24043 3122 aaKnown RBP15.14■□□□□ 0.01
SF3B2-212ENST00000531589 FRMPD4Q14CM0 1322 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 SPATA31C2B4DYI2 1134 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 HAS3O00219 553 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 FIBPO43427 364 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 BAIAP3O94812 1187 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 SELPP16109 830 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 PTK7Q13308 1070 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 KRT32Q14532 448 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 HSDL1Q3SXM5 330 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 SGMS1Q86VZ5 419 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
SF3B2-212ENST00000531589 FANCBQ8NB91 859 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 GIMAP8Q8ND71 665 aaPredicted RBP15.13■□□□□ 0.01
SF3B2-212ENST00000531589 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
SF3B2-212ENST00000531589 USP26Q9BXU7 913 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 HDAC6Q9UBN7 1215 aa15.13■□□□□ 0.01
SF3B2-212ENST00000531589 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 MEIS2O14770 477 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 CDC45O75419 566 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 ZNF286BP0CG31 522 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 MRPS9P82933 396 aaKnown RBP15.12■□□□□ 0.01
SF3B2-212ENST00000531589 SP2Q02086 613 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 RBL2Q08999 1139 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 METTL7BQ6UX53 244 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 NLRX1Q86UT6 975 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 VWCEQ96DN2 955 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 CDHR1Q96JP9 859 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 NKX2-4Q9H2Z4 354 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 PSTPIP2Q9H939 334 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
SF3B2-212ENST00000531589 RTEL1Q9NZ71 1219 aa15.12■□□□□ 0.01
SF3B2-212ENST00000531589 H3BRB1 525 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 SORBS3O60504 671 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
SF3B2-212ENST00000531589 RXRAP19793 462 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 TSGA10IPQ3SY00 556 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 PPP2R2DQ66LE6 453 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 TMTC3Q6ZXV5 915 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
SF3B2-212ENST00000531589 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 TEX2Q8IWB9 1127 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
SF3B2-212ENST00000531589 SENP7Q9BQF6 1050 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 PRDM12Q9H4Q4 367 aa15.11■□□□□ 0.01
SF3B2-212ENST00000531589 TUT1Q9H6E5 874 aaKnown RBP15.11■□□□□ 0.01
SF3B2-212ENST00000531589 YBX2Q9Y2T7 364 aaKnown RBP15.11■□□□□ 0.01
SF3B2-212ENST00000531589 SPDYE3A6NKU9 549 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 CKBP12277 381 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 KCNJ6P48051 423 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 RABGGTBP53611 331 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 CYFIP1Q7L576 1253 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
SF3B2-212ENST00000531589 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 C16orf70Q9BSU1 422 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 LRRC2Q9BYS8 371 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
SF3B2-212ENST00000531589 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
SF3B2-212ENST00000531589 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 MAFGO15525 162 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 ZBTB43O43298 467 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 EFCAB14O75071 495 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 LGALS2P05162 132 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 GNAT1P11488 350 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 FGD1P98174 961 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 CNKSR3Q6P9H4 555 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
SF3B2-212ENST00000531589 GPRASP2Q96D09 838 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 CTAGE1Q96RT6 745 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-212ENST00000531589 EMSYQ7Z589 1322 aa15.09■□□□□ 0.01
SF3B2-212ENST00000531589 CXCL10P02778 98 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 IGFBP4P22692 258 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
SF3B2-212ENST00000531589 RTN1Q16799 776 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 HERC6Q8IVU3 1022 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 DHX38Q92620 1227 aaKnown RBP15.08■□□□□ 0
SF3B2-212ENST00000531589 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms