RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ENPP1P22413 925 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 GPTP24298 496 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SMARCA1P28370 1054 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CCT8P50990 548 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 RRP1P56182 461 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 HDAC4P56524 1084 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 IGBP1P78318 339 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ZBED6P86452 979 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ADCY1Q08828 1119 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ZBTB17Q13105 803 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 PAK2Q13177 524 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 MPP3Q13368 585 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ARHGEF6Q15052 776 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CCDC57Q2TAC2 916 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 MUM1Q2TAK8 710 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 LRRFIP1Q32MZ4 808 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 BOLA3Q53S33 107 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SGO2Q562F6 1265 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 PPM1JQ5JR12 505 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CCDC158Q5M9N0 1113 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SPDYCQ5MJ68 293 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 NUGGCQ68CJ6 796 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CDCA2Q69YH5 1023 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CDPF1Q6NVV7 123 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CC2D1AQ6P1N0 951 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 GIMAP6Q6P9H5 292 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ARHGAP22Q7Z5H3 698 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CCDC50Q8IVM0 306 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 STK11IPQ8N1F8 1099 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ARL6IP6Q8N6S5 226 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SLC43A3Q8NBI5 491 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 MAGEC3Q8TD91 643 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 FBLIM1Q8WUP2 373 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 MAML1Q92585 1016 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ARHGAP45Q92619 1136 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CENPTQ96BT3 561 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 GPRASP2Q96D09 838 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 VMP1Q96GC9 406 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SEC16BQ96JE7 1060 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CDHR1Q96JP9 859 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SLC39A3Q9BRY0 314 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 TSGA10Q9BZW7 698 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 LRRC27Q9C0I9 530 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 CAPN10Q9HC96 672 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 DCAF16Q9NXF7 216 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 TBC1D7Q9P0N9 293 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 TTLL3Q9Y4R7 772 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 TOP2AP11388 1531 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ATXN2Q99700 1313 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 ABCA5Q8WWZ7 1642 aa5.41□□□□□ -1.54
ECHDC1-221ENST00000531582 NCOA2Q15596 1464 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 ERICH3Q5RHP9 1530 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 LIN7AO14910 233 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 KIF3BO15066 747 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 TTI1O43156 1089 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 PGRP06401 933 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 HCLS1P14317 486 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 RAB6AP20340 208 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 MCM3P25205 808 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 ROR2Q01974 943 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 CYP27A1Q02318 531 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 BIRC3Q13489 604 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 DOC2BQ14184 412 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 KCTD2Q14681 263 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 RCN1Q15293 331 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 CPSF6Q16630 551 aaKnown RBP eCLIP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 TMEM201Q5SNT2 666 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 SLC6A19Q695T7 634 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 ISM2Q6H9L7 571 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 ARMC9Q7Z3E5 817 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 DAAM2Q86T65 1068 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 DZIP1Q86YF9 867 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 BRSK2Q8IWQ3 736 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 B4GALNT2Q8NHY0 566 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 N4BP2L2Q92802 583 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 TCHPQ9BT92 498 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 UBXN6Q9BZV1 441 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 TANGO6Q9C0B7 1094 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 SEMA6CQ9H3T2 930 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 EHMT1Q9H9B1 1298 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 ARGLU1Q9NWB6 273 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 TRMT1Q9NXH9 659 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 UBP1Q9NZI7 540 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 CHPF2Q9P2E5 772 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 HDAC6Q9UBN7 1215 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 LCMT1Q9UIC8 334 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 CROTQ9UKG9 612 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 STRIP2Q9ULQ0 834 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 DIS3Q9Y2L1 958 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 CSADQ9Y600 493 aa5.4□□□□□ -1.54
ECHDC1-221ENST00000531582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms