RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 PIK3CDO00329 1044 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 UBA1P22314 1058 aaKnown RBP15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 HOXC8P31273 242 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 LIFRP42702 1097 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 GNAQP50148 359 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 TJAP1Q5JTD0 557 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 LRRC8DQ7L1W4 858 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 HERC6Q8IVU3 1022 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 IL31RAQ8NI17 732 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 CTCFLQ8NI51 663 aaPredicted RBP15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 SPATA33Q96N06 139 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 KIAA1217Q5T5P2 1943 aa15.41■□□□□ 0.06
AMBRA1-210ENST00000531542 SPTBN5Q9NRC6 3674 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 SPATA31C2B4DYI2 1134 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 KIF28PB7ZC32 967 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 EFCAB14O75071 495 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 GGPS1O95749 300 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 CKBP12277 381 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 MCM5P33992 734 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 SP2Q02086 613 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 TRIM71Q2Q1W2 868 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 PPP1R13LQ8WUF5 828 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 RRP36Q96EU6 259 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 C16orf70Q9BSU1 422 aa15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 LSG1Q9H089 658 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-210ENST00000531542 ABHD14A-ACY1A0A1B0GW23 586 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CA3P07451 260 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 ZNF286BP0CG31 522 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CALM1P0DP23 149 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CALM2P0DP24 149 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CALM3P0DP25 149 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 MYOGP15173 224 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 MRPS9P82933 396 aaKnown RBP15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 NEDD9Q14511 834 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 NECTIN1Q15223 517 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CNKSR3Q6P9H4 555 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 TRAF7Q6Q0C0 670 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 SERINC5Q86VE9 423 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 FCHSD1Q86WN1 690 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 SENP7Q9BQF6 1050 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 USP26Q9BXU7 913 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 MLXIPQ9HAP2 919 aa15.39■□□□□ 0.05
AMBRA1-210ENST00000531542 H3BRB1 525 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 SH2B2O14492 632 aaPredicted RBP15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 MEIS2O14770 477 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 FIBPO43427 364 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 PRC1O43663 620 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 NBNO60934 754 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 TEX2Q8IWB9 1127 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 ESYT1Q9BSJ8 1104 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 ALG1Q9BT22 464 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 TUT1Q9H6E5 874 aaKnown RBP15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 THEGQ9P2T0 379 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 MYH6P13533 1939 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 EMSYQ7Z589 1322 aa15.38■□□□□ 0.05
AMBRA1-210ENST00000531542 CAND2O75155 1236 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 IGFBP4P22692 258 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 KCNJ6P48051 423 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 TAP1Q03518 808 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 CUL5Q93034 780 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 ASB2Q96Q27 587 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 TRANK1O15050 2925 aa15.37■□□□□ 0.05
AMBRA1-210ENST00000531542 CCDC69A6NI79 296 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 SLC27A2O14975 620 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 LGALS2P05162 132 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 MRPS5P82675 430 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 IKBKEQ14164 716 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 HIC1Q14526 733 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 BMP2KLQ5H9B9 411 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 ZNF618Q5T7W0 954 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 SGMS1Q86VZ5 419 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 GPR20Q99678 358 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 MTCH2Q9Y6C9 303 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 MYO9BQ13459 2157 aa15.36■□□□□ 0.05
AMBRA1-210ENST00000531542 C17orf102A2RUQ5 167 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 NOP56O00567 594 aaKnown RBP15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 TLL1O43897 1013 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 GJB5O95377 273 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 MBTPS1Q14703 1052 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms